Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2097 ATGAATGGTTATGCAAGTATTGAGGCAGAGGACTCTGAATTTGTGGAAGCTGATCCTACTGGAAGATATGGAAGATACAACGAAATTCTTGGCAAAGGGGCTTCGAAGACAGTTTACAGAGCATTCGATGAGTACGAAGGGATAGAAGTAGCATGGAATCAAGTGAAGCTCTACGATTTTCTGCAGAATCCTGAAGATCTCGAGAGGTTGTACTGTGAAATTCATCTTCTCAAGACCTTGAAACACAAAAGCATCATGAAGTTCTATACTTCCTGGGTTGATACTGCTAATAGGCACATTAACTTCGTCACTGAAATGTTCACCTCTGGCACTCTCAGACAGTACAGGTTAAAACACAGAAAAGTTAACATTAGAGCAGTGAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTTGTCTATCTTCACAGTCATGACCCTCCTGTGATCCACAGAGACCTCAAGTGTGACAACATTTTCATCAATGGCAATCAAGGGGAAGTTAAAATTGGTGATCTTGGCCTCGCTGCAATTCTCCGCAAATCTAACGCTGCTCGTTGCGTTGGCACACCTGAATTTATGGCTCCAGAAGTGTATGAAGAGGATTACAATGAATTGGTTGATATATACTCTTTTGGAATGTGCATCTTGGAGATGGTCACATTTGAATATCCTTATAGTGAATGCACCCATCCTGCTCAAATTTACAAGAAAGTTGTCTCTGGGAAGAAACCAGAAGCTCTTTACAAAGTAAAGGATCCTGAGGTTAGACAATTTGTGGAGAAATGCTTAGCAACGGTGTCCCTCAGGCTTTCTGCGAAGGAACTTCTGGAGGACCCTTTTCTCCTAATTGAGGACTATGGGTCTGAGATGAAACCACTTCGGTATCAAGGAGATTGCTACGAAGTAACCCCATTTTATAGACAACCTCTTAATGGAGTTCACAGCAGTAACAACTCGATCAATGAGTACACTGATTATCTCAGTGGTTATGGACCTGAATCTGAGTTAACGAGCGAAATTGATCTCTTTGATTGTGAAGAGGACGATAATTTGGCTGAAGTTAACGCTGTAATAAAAGGCAGGAGACGAGAAGATGATGGTATTTTTCTGAGACTCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAATATCTACTTCCCGTTCGACATAGAGACTGATACTGCACTGAGTGTAGCAAATGAAATGGTAGCTGAGCTAGACATAACTGACCAAGATGTAACAAAAATAGCAGACATGATAGATAATGAAATTGCAATCTTGGTCCCAGAGTGGAAAACTGGACCTAGAATAGAGGAAAGTCCAGAATGCACAAGTGAAAATCTCTGCCACAATTGTGCTTCAAATGGTAACTTCTTTAACTACGTGTCATCAAATAGCCCAACAGCCAAGAATCTACAATTTCTTCACTGTTCCAGAAACGGCTGCTCAGCTATTCATGGCCGTTTTGAGGAGATCACATACCAAGTTGAAGGGCCTGAAAATTGTACTACGAATGGTGCTGCAGCTGTATCAAGCCAATCCACTGGCATTCACTATAATATCTGGGCTCAGAGAGATGAGCTAGAACTAAGTTCAGAGGAGTTAAGAGACATTCACTGTGACAAATCACATGAGGCATCAAACCAATCAATAATAAAGGAGGATGAGAGAATTATTAATGTGGATGATCAAAGGGATCCCAACACAACAGAAACACCTTCCAATCATGCTTTAGATTGTGCTCTCTTGGACTCTGAGAATGAAATTAGGCAAGAACTGAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAGCAATTAGTGGGAAAACCAAAACTCACAAGTATGTCTCCTGACCCTGAAGAATCAGAAGAGCGTAAAAAACATGGTGGGGTTCCAAAGGAATCAGTCACACCACACTGGAAGATACAGAACAATAAATCATTCTCGAGGCTTTTGGCCACCAGGAAGCGATTTTCAGTTGATGCTGAGAAGTATATGATGTGTTCCACTATGGCTAATCAAATGTTGCAAGATGTAGATGAGACTAGTGGGTCTGATAGTCCCGAGCAAATGGTGACAGCCAAGGATTTCTATGCAGGAGCATTGCTTCCACAATCCCTGCATAGAGCGACCTCTCTTCCAGTTGATGCAGTACATGTGTAG 2181 0.4195 MNGYASIEAEDSEFVEADPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKSIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRKVNIRAVKHWCRQILEGLVYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPEALYKVKDPEVRQFVEKCLATVSLRLSAKELLEDPFLLIEDYGSEMKPLRYQGDCYEVTPFYRQPLNGVHSSNNSINEYTDYLSGYGPESELTSEIDLFDCEEDDNLAEVNAVIKGRRREDDGIFLRLRIADKEGRVRNIYFPFDIETDTALSVANEMVAELDITDQDVTKIADMIDNEIAILVPEWKTGPRIEESPECTSENLCHNCASNGNFFNYVSSNSPTAKNLQFLHCSRNGCSAIHGRFEEITYQVEGPENCTTNGAAAVSSQSTGIHYNIWAQRDELELSSEELRDIHCDKSHEASNQSIIKEDERIINVDDQRDPNTTETPSNHALDCALLDSENEIRQELRWLKAKYQMQLRELRDQQLVGKPKLTSMSPDPEESEERKKHGGVPKESVTPHWKIQNNKSFSRLLATRKRFSVDAEKYMMCSTMANQMLQDVDETSGSDSPEQMVTAKDFYAGALLPQSLHRATSLPVDAVHV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2097 726 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Dere03g2097 726 Gene3D - 367 450 - -
Dere03g2097 726 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 424 IPR024678 GO:0004674|GO:0005524
Dere03g2097 726 Coils Coil 590 610 - -
Dere03g2097 726 MobiDBLite consensus disorder prediction 545 564 - -
Dere03g2097 726 MobiDBLite consensus disorder prediction 545 575 - -
Dere03g2097 726 FunFam probable serine/threonine-protein kinase WNK9 366 450 - -
Dere03g2097 726 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2097 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Dere03g2097 726 CDD STKc_WNK 22 281 - -
Dere03g2097 726 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2097 726 MobiDBLite consensus disorder prediction 622 640 - -
Dere03g2097 726 Gene3D Transferase(Phosphotransferase) domain 1 107 284 - -
Dere03g2097 726 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Dere03g2097 726 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Dere03g2097 726 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2097 726 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Dere03g2097 726 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 632 - -
Dere03g2097 726 MobiDBLite consensus disorder prediction 611 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2097 Dere-ChrDere03 33146911 33149782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2097 1 492 MAP Kinase Kinase Kinase AT3G22420 60.377 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere03g2097 Pkinase 6.2e-49 CL0016