Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2088 ATGGAGGTTCCCACTAAACTCCTCGCATCTTGTGTGCCATTATTTCTGTTCATTCTATGCTCTAATGCTCAGACGAGCTCCAATTCTATTGAACTGGGTTCAAGCATTGTGGCTGGTTCTAATCTGTCTTGGAAATCACCCTCTGGTGATTTTGCTTTTGGGTTCTACCCTCTCGTCGATGGTCGCTACCTTGTTGGAATCTGGTTCGATAAGATTCCCCAGAAAACTCTGGTCTGGTCTGCAAACCGTGATGATCCGGCCCTAAATGGATCCACCGTCAATCTCACATGGAGTGGCCAGCTTGAGCTCCATCATGCAAAGTGGTCTTCGTTTTCAATCTACCATGGAACAAAGAATGCTTCTTCTGCTTCATTGCAGGATGATGGAAACTTCATCTTGAAAAACTCACTCGGAAACACCATCTGGCAGAGCTTTGATTCACCAACAGATACCATTCTATTAGGCCAAAACTTGGTCATGAATCAAAGTATCTACTCCAATGCCAACGGAACACAAGATTACTCAACCGGGAATTACAAGTTCGTGGTCCAATTGGATGGCAACATCCTTCTCGTTGCTTACAGGTATACCCCCTATGCTTATTGGTATACTGGAACAATCCACAACACTAGTGTCAGGATTATCTTCGACAACAAGACAGCTATGCTTCACGCTGTCAATGGCACCGAAGACATATTCCAAATGACAAAGCCAGGCCAAGTGCCAACCCCAATCGATGATTTTTACCATCGAGCAACCATCAGCGATCGTGGAAACTTCGAACAGTTGATTTTCCATAAAGAAAATGGAACAGAGTGGACGGTTATATGGAGTGCTTTAACAGAGCCCTGCACTGTGTTTGGCATTTGTGGTGAGAATGGCTTTTGCACTTCACCTGACAATAAGGTAGTCAACTGTAGCTGCTTGCCTGGGTATACACCTTTGGATCCTCATTTTCTCTCCAAAGGCTGTTATCTCACTATGGTGATGGATTTTTGCGCTGCAAATTCCTCTGCCTCAGACTTTGAAGTGCAAGAAATTAATAATGCTGATATACTCAACTCAAATTTTGCTGATATGCAAGTTAAACCTTCTCCTGATTTGAATAGTTGTAGGTTGGAAGTGATCAATGATTGTTTCTGCATGGCTGGTGTTTATGATGGCATTAACTGTTATAAGAAACGGACACCTCTTTTAACTGGAACAATAAGCATCCCTAGCACTAATAATAAAGTGGCCCTGGTTAAAGTTCCTCTGGTTCACAAGGACGACGGAAATGACTCAGCGTCTTGGGTTGTTCTGCTTGTTTCCTTCTTATCTTGTTCCCTACTTGCTCTTGTGTTTGCAGCTTCTGCTATTTATCATAACCCGAAGTTTTTCCGTTGGATGCATATGGAGCCACCCCCCAAACCGAAGCCGGTGGACATCAATCTGAAGACATTTTCATTCCAAGAGTTGAGAGAAGCAACAAAGGGGTTCAAAAACAATCTTGGTCGAGGAGCATTTGGTACTGTCTATAGTGGTGTTCTAACCTTGGAGGGCGAACAGGTTGAGGTTGCTGTGAAACAACTGGAAAAAGGAGTGGAACAAGGTGAGATTCGAGAGAAGGAGTTTGTGACAGAAGTTCAAGTCATTGGTCTGACTCATCATAGGAATCTTGTCAAGTTATTAGGTTTCTGCAATGAACAGGATCATCGTCTTCTAGTTTATGAGCTGATGAAAAATGGGTCAGTCTTCAGTTTCCTTTTCGGGGAAGGGGATAAACCCAGATGGGAAGATAGAGCCAAGATTGTGCTTGAAGTTGCAAGAGGCCTGCTATATCTGCATGAAGAGTGTGACCCACAGATAATCCATTGTGACATAAAGCCACAGAATGTTCTTCTTGACTCAAAGTATGCTGCAAAAATCTCAGATTTCGGCCTTTCGAAGTTACTAATGAAAGACAAAACCCGAACCAGTACCAATGTAAGAGGGACAATGGGATACATGGCACCAGAATGGCTCAAGAATGCACCTGTGACTGCAAAGGTTGATGTCTATAGCTTCGGGGTCATGTTGTTGGAGATCATATCCTGCAGAAGGCACATGGAGCTACATCAAATTGAAGATGGAAGAGAGGGTGATGACATGATACTCGTAGATTGGGTTCTATATTTGGCAAAAGAAGGGAATTTAAGAGTGATGTTGAGTCATGATCTTGAAGCTTTAAATGATTTCAATAGGTTTGAGAGAATGGTTATGGTTGGATTGTGGTGCCTATCTCCTAACCCAACTACTCGACCATCGATGAAGAAGGTGACACAAATGTTGGAAGGAACTATGGAAGTTGGTATTCCTCCTCTGGTTGATGGACAAATGTAG 2361 0.4307 MEVPTKLLASCVPLFLFILCSNAQTSSNSIELGSSIVAGSNLSWKSPSGDFAFGFYPLVDGRYLVGIWFDKIPQKTLVWSANRDDPALNGSTVNLTWSGQLELHHAKWSSFSIYHGTKNASSASLQDDGNFILKNSLGNTIWQSFDSPTDTILLGQNLVMNQSIYSNANGTQDYSTGNYKFVVQLDGNILLVAYRYTPYAYWYTGTIHNTSVRIIFDNKTAMLHAVNGTEDIFQMTKPGQVPTPIDDFYHRATISDRGNFEQLIFHKENGTEWTVIWSALTEPCTVFGICGENGFCTSPDNKVVNCSCLPGYTPLDPHFLSKGCYLTMVMDFCAANSSASDFEVQEINNADILNSNFADMQVKPSPDLNSCRLEVINDCFCMAGVYDGINCYKKRTPLLTGTISIPSTNNKVALVKVPLVHKDDGNDSASWVVLLVSFLSCSLLALVFAASAIYHNPKFFRWMHMEPPPKPKPVDINLKTFSFQELREATKGFKNNLGRGAFGTVYSGVLTLEGEQVEVAVKQLEKGVEQGEIREKEFVTEVQVIGLTHHRNLVKLLGFCNEQDHRLLVYELMKNGSVFSFLFGEGDKPRWEDRAKIVLEVARGLLYLHEECDPQIIHCDIKPQNVLLDSKYAAKISDFGLSKLLMKDKTRTSTNVRGTMGYMAPEWLKNAPVTAKVDVYSFGVMLLEIISCRRHMELHQIEDGREGDDMILVDWVLYLAKEGNLRVMLSHDLEALNDFNRFERMVMVGLWCLSPNPTTRPSMKKVTQMLEGTMEVGIPPLVDGQM 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2088 786 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Dere03g2088 786 Pfam S-locus glycoprotein domain 248 314 IPR000858 GO:0048544
Dere03g2088 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 780 - -
Dere03g2088 786 SMART blect_4 27 148 IPR001480 -
Dere03g2088 786 Pfam D-mannose binding lectin 76 164 IPR001480 -
Dere03g2088 786 ProSitePatterns Protein kinases ATP-binding region signature. 497 522 IPR017441 GO:0005524
Dere03g2088 786 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Dere03g2088 786 FunFam S-receptor-like serine/threonine-protein kinase 464 572 - -
Dere03g2088 786 SUPERFAMILY Protein kinase-like (PK-like) 475 775 IPR011009 -
Dere03g2088 786 Gene3D - 21 145 IPR036426 -
Dere03g2088 786 PIRSF SRK 1 783 IPR024171 GO:0004674
Dere03g2088 786 Pfam Protein kinase domain 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2088 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 777 - -
Dere03g2088 786 SMART serkin_6 491 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2088 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Dere03g2088 786 Gene3D Phosphorylase Kinase; domain 1 469 572 - -
Dere03g2088 786 CDD STKc_IRAK 497 772 - -
Dere03g2088 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 146 - -
Dere03g2088 786 Gene3D - 146 236 IPR036426 -
Dere03g2088 786 ProSiteProfiles Protein kinase domain profile. 491 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2088 786 CDD B_lectin 46 148 IPR001480 -
Dere03g2088 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 207 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2088 Dere-ChrDere03 33077861 33080221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2088 477 772 Receptor kinase-like Gene Family AT1G60800 43.137 4.71e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere03g2088 Pkinase 1.5e-50 CL0016