Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2086 ATGGAGGTTTCCAATAAACTCCTCGCATCTTGTGTGCCATTTTTTATGTTCATTCTATGCTCTAATGCTCAGACTAGCTCTAATTCTATTGAACTGGGTTCAAGCATTGTGGCTGGTTCTAATCTATCTTGGAAATCACCCTCTGGTGATTTTGCTTTTGGGTTCTATCGTCTCGTCAATAGTCGCTACCTTGTTGGAATCTGGTTCGATAAGATTCCCCAGAAAACTCTGGTCTGGTCTGCAAACCGGGATGATCCGGCTCAAATTGGATCCACCATCAATCTCACACGGAGTGGCCGGTTCGAGCTCCATCATGCAAATGGGTCTTTATTTTCAATCTACAATGGAACAAGTAATGCTTCTTCTGCTTCAATGCAGGATGACGGAAACTTCGTCTTGAAAAACTCACTCGGAAACATCATCTGGCAGAGTTTTGACTCACCAACAGATACCATTCTATTAGGCCAAAACTTGCACATGAGTCAGATTATCTACTCCAATGCCAATGGAACACATGATTACTCAACCGGAAATTACAAGTTGGAGGTCCAACCTGACGGCAACATTGTTCTCAATTCTGTCAGGTTTTACGGCCCTGCTTATTGGTACACTGGAACAATTTACAACAATAGTGTCAGGATTGTCTTTGACAACAAGACAGCTTTACTTTACGCTGTCAACGGCACCCAAAATATATACCAAATGACAGACCCAAACCAAGTACTTACCCCAATCGATGATTTTTATCATCGAGCAACCATCAATGACCATGGAATCTTCGAGCATTTGATTTTCCGTAAAGAAAATGGAACAGAGTGGACGCCTATATGGAGTGCTATAACAGAGCCCTGCACTGTGACTGCCATTTGTGGGGTGAATGGCTTTTGTACTTCACCTGACAATAAGGTAGTCAATTGTAGCTGCTTGCCTGGGTATACACCTTTGGATCCTTATGTTCCCTCCAAAGGCTGTTACCCCAATTTGGTGATGGATTTTTGTGCCGCAAATTCCTCTGCCTCAGACTTTGAAGTGAAAGAAATTAATAATGCTGATATAACCAACTTATTAAGTTTTGCTAATATGCAATGGATACCTTCTTCTGATTTGAACAGTTGCAGGAGGGAAGTGATCAATGATTGTTTCTGCATGGCTGGTGTTTTAGTTGGCACTGATTGTTTTAAGAAAAGAACACCTCTTTTAAATGGTAGAATAAGCATCCCTTCAACTAGCAATAGAGTGGCCCTGGTTAAAGTTCCTCTGGTTCACAAAGACGACGGAAATGACTCTCCTTCATGGGTTGTTCTGCTTGTTTCTTTCTTATCTTGTTCCCTACTTGCTCTTGTGTTTGCAGCTTCTGCTATCCATCATAACCCAAAGATTTTCCGTTGGATGCGTAAGGAGCCACCCCCCAAGCCGAAGCCAGTGGACATCAATCTCAAAACATTTTCATTCGAAGAGTTGAGAGAAGCAACAAAGGGGTTCAAAAACAATCTTGGTCAAGGAGCATTTGGTACTGTCTATGGTGGTGTTTTAACCTTGGAGGGCGAACAGGTTGAGGTTGCTGTGAAACAACTGGAAAAAGGAGTGGAACAAGGTGAGATTCGAGAGAAGGAGTTTGTGACAGAAGTTCAAGTCATTGGTCTGACTCATCATAGGAATCTTGTCAAGTTATTAGGTTTCTGCAATGAACAGAATCATCGTCTTCTAGTTTATGAGCTGATGAAAAATGGGTCAGTCTTCAGTTTCCTTTTCGGGGAAGGGAACAAACCCAGATGGGAAGATAGAGCCAAGATTGTGCTTGAGGTTGCAAGAGGCCTGCTATATCTGCATGAAGAGTGTGACCCACAGATCATCCATTGTGACATAAAGCCACAGAATGTTCTTCTTGACTCAAAGTATGCTGCAAAAATCTCAGATTTCGGCCTTTCTAAGTTGCTAATGAAAGACAAAACTCGAACCAGTACCAATGTAAGAGGGACAATGGGATACATGGCACCAGAATGGCTCAAGAATGCACCTGTGACTGCAAAGGTTGATGTCTATAGCTTCGGGGTCATGTTGTTGGAGACCATATCTTGCAGAAGGCACATAGAGCTACATCAAATTGAAGATGGAAGAGAGGGTGATGACATGATACTCGTAGATTGGGTTCTATATTTGGCAAAAGAAGGGAATTTAAGAGTGATGGTGAGTCATGATCTTGATGCTTTAAATGATTTCAATAGGTTTGAGAGAATGGTTATGGTTGGATTGTGGTGCCTATCTCCAAACCCAACTGTTCGACCATCGATGAAGAAGTTGACACAAATGTTGGAAGGAACTGTAGAAGTTGGTATTCCTCCTCTGGTTGATGGACAAGTGTTGTAA 2367 0.4216 MEVSNKLLASCVPFFMFILCSNAQTSSNSIELGSSIVAGSNLSWKSPSGDFAFGFYRLVNSRYLVGIWFDKIPQKTLVWSANRDDPAQIGSTINLTRSGRFELHHANGSLFSIYNGTSNASSASMQDDGNFVLKNSLGNIIWQSFDSPTDTILLGQNLHMSQIIYSNANGTHDYSTGNYKLEVQPDGNIVLNSVRFYGPAYWYTGTIYNNSVRIVFDNKTALLYAVNGTQNIYQMTDPNQVLTPIDDFYHRATINDHGIFEHLIFRKENGTEWTPIWSAITEPCTVTAICGVNGFCTSPDNKVVNCSCLPGYTPLDPYVPSKGCYPNLVMDFCAANSSASDFEVKEINNADITNLLSFANMQWIPSSDLNSCRREVINDCFCMAGVLVGTDCFKKRTPLLNGRISIPSTSNRVALVKVPLVHKDDGNDSPSWVVLLVSFLSCSLLALVFAASAIHHNPKIFRWMRKEPPPKPKPVDINLKTFSFEELREATKGFKNNLGQGAFGTVYGGVLTLEGEQVEVAVKQLEKGVEQGEIREKEFVTEVQVIGLTHHRNLVKLLGFCNEQNHRLLVYELMKNGSVFSFLFGEGNKPRWEDRAKIVLEVARGLLYLHEECDPQIIHCDIKPQNVLLDSKYAAKISDFGLSKLLMKDKTRTSTNVRGTMGYMAPEWLKNAPVTAKVDVYSFGVMLLETISCRRHIELHQIEDGREGDDMILVDWVLYLAKEGNLRVMVSHDLDALNDFNRFERMVMVGLWCLSPNPTVRPSMKKLTQMLEGTVEVGIPPLVDGQVL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2086 788 Pfam D-mannose binding lectin 76 162 IPR001480 -
Dere03g2086 788 Gene3D Phosphorylase Kinase; domain 1 470 573 - -
Dere03g2086 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 146 - -
Dere03g2086 788 Pfam S-locus glycoprotein domain 247 314 IPR000858 GO:0048544
Dere03g2086 788 Gene3D - 21 145 IPR036426 -
Dere03g2086 788 PIRSF SRK 1 785 IPR024171 GO:0004674
Dere03g2086 788 SMART blect_4 27 148 IPR001480 -
Dere03g2086 788 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Dere03g2086 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 206 IPR036426 -
Dere03g2086 788 SMART serkin_6 492 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2086 788 ProSitePatterns Protein kinases ATP-binding region signature. 498 523 IPR017441 GO:0005524
Dere03g2086 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 778 - -
Dere03g2086 788 FunFam S-receptor-like serine/threonine-protein kinase 463 573 - -
Dere03g2086 788 CDD STKc_IRAK 498 773 - -
Dere03g2086 788 Pfam Protein kinase domain 495 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2086 788 Gene3D - 146 243 IPR036426 -
Dere03g2086 788 Gene3D Transferase(Phosphotransferase) domain 1 574 777 - -
Dere03g2086 788 SUPERFAMILY Protein kinase-like (PK-like) 476 775 IPR011009 -
Dere03g2086 788 ProSiteProfiles Protein kinase domain profile. 492 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2086 788 CDD B_lectin 46 148 IPR001480 -
Dere03g2086 788 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 781 - -
Dere03g2086 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2086 Dere-ChrDere03 33066576 33068942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2086 478 776 Receptor kinase-like Gene Family AT5G45780 43.750 3.26e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere03g2086 Pkinase 2.1e-49 CL0016