Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2085 ATGGCGCTTTCTATAATCCTACCATGTATTCTCGCACTAGTTTCATTCTTAAATGGCTTACATGCTCAGAATCAGTCCTCTGAAATAAGTCTGAATTCCAGTATCACTGCTGGATCAAATTCTTCTTGGAAATCTCCATCAGGGGATTTTGAATTTGGATTCCACTCTCTTCCCGGTGGTTACTATCTGGTTGGAATATGGTTCGGGAAAATCCCAGAGGAAACTCTGGTTTGGTACTATGACCCCCCAGTGGAAGCAAATTCCATAATCCAACTCACTTTGGGAGGCCACCTTGTGCTCACATATCCCGACGGAACCACTGCTCAGATAGATAGTAAAAATGGAGACAGTGCAAGCTCAGCCTCCATGCAAGACGACGGCAATTTTGTTATGAAAGACTCCAATTCAAATGATGTCTGGCGGAGTTTTGATTCTCCCACTAACACAATGTTACCAGGGCAAGTCTTGAATGAAAATGATATGCTCTATGCCAAAGGGAAAGGAACTCTAAACTACTCAGATGGAAACTTCAGGGTTCACATGCAGAACGATGGGAACTTGTTGCTCTCTGCTTATCAGTGGTCTGATCCTGCTTATTGGTACTCTGCAACAACAACATTCAATAACGTAAGTTTGGTGTTCAATGAAAGTGCTTTCTTGTATCTTACCAATGGCACTATCAATATATACCCTCTAACGAATAAACCTCCAACTCCAACCAAGGATTTCTATCACCGAGCAACGATAGATGAAAATGGCAATTTCCAGCAATATGCTTACAACCGAAAAAATGGCAGCAGGTGGACAAGGGTGTGGAGAGCCATTGATGACCCTTGCAGAGTGGATGCTGTTTGCGGGGTGAACGGCTTGTGCTCTTCGCCTGATAATGAATCGGTGAACTGTATATGCATTCCAGGTTTTATCCCATTTAAACCTGCAGATGTGTCCTTAGGATGCCGCCCACAAAATGTGATTAATTATTGTGCAGAAGAGCCTTCTAGATTAAACTTCAAGCTAGAGGTGCTTCTTGATACAGATTTCCAGTTTGATCCACAATCAGACTATGCTAATTTGAGCCCTGTTGATTTAGAAGGTTGTAAGAAATATGTCATGGATGATTGTAATGTCGTTGCTGCAACCTTCAATGCTACATCTTCAACATGTGCCAAAAAGAGGATGCCATTGGTGAATGCCAGAAAGAGTTCATCATCAAAAGGGCAAATAGCGCTGCTTAAGGTTCCTAATGACAACAGTAATGAGTCTGGCAGATTCAAAGGTTCTAAAAAGAAGATTTTTGATGTCAGAGTTTTTCTGAAGGTCATGCTTGCTGTTAGTTCCACCCTTGCCTGCTTGTTCGGAGCCCTTGCTGTCTACTACCACCCATTAGCTCAAAGACTAATGAGAAGAAAGAAGTTTCTATATGCAAGCGCCATTGGAATCAACTTCAGAGAGTTTACATTCCAGGAGCTCCATGAAGCAACGGGTGGATTCAGTAAGACTATTGGTAAGGGATCTTCAGGCAAAGTCTATACTGGAAATCTAGCCATAGATGATGCAGAAGTTGCTATTGCAGTGAAGAAGCTGGAGACAAAGATCGAAAGAAATGAACAGGAGTTCATGACTGAGCTCAAGATAATCGGTCGCACCCATCACAAAAACCTAGTAAGACTTCTGGGATTCTGCATTGAGAAAAGCCATAGACTTCTTGTCTATGAGCTAATGCCAAATGGAGCACTGTCCAATTTCCTGTTTGGCCAGCGAGAAAAACCTCACTGGGGTCAAAGGATTGATATAGCTCTTGGAATTGCAAGAGGCTTGCTTTACTTGCACGAGGAATGTGAGACCCAGATCATACATTGTGACATCAAGCCCCAAAATGTGTTGCTTGATGCCAATTATACAGCAAAGATTGCAGATTTTGGGCTTTCCAAGCTCCTGAACAAAGAGCAAACCAGAACGAACACTAATTTCAGAGGAACTATAGGGTACATAGCCCCTGAATGGCTAAGGAGTGCACCAATAAGTGCTAAAGTTGATGTCTTCAGCTTTGGGATTATGTTACTCGAGATTATTTGTTGTAGAAGGCATGTCCAATCAAATCAAGAAGACGAGGAAGAGAGTCAAGAAGATGATACAGTTCTTGCAAAATGGGTTCTAAGGTGTATGATTTGTAAGAAACTAGAGGAAGTGGTTGGCCATGATTCAGAAGTACTAAGTGATTTCCAGAGGTTTGAGCAAATGGCCTTGGTTGGGTTATGGTGTATCCATCCAAATGCAGCTCTTAGACCAACAATGAAGCAAGTGAATCAAATGCTAGAGGGAACCATGCTAGTTGGGGTTCCACCCTTGCTTCATCAACAAATGACGGCAGATCAGAGCTTATAG 2385 0.4239 MALSIILPCILALVSFLNGLHAQNQSSEISLNSSITAGSNSSWKSPSGDFEFGFHSLPGGYYLVGIWFGKIPEETLVWYYDPPVEANSIIQLTLGGHLVLTYPDGTTAQIDSKNGDSASSASMQDDGNFVMKDSNSNDVWRSFDSPTNTMLPGQVLNENDMLYAKGKGTLNYSDGNFRVHMQNDGNLLLSAYQWSDPAYWYSATTTFNNVSLVFNESAFLYLTNGTINIYPLTNKPPTPTKDFYHRATIDENGNFQQYAYNRKNGSRWTRVWRAIDDPCRVDAVCGVNGLCSSPDNESVNCICIPGFIPFKPADVSLGCRPQNVINYCAEEPSRLNFKLEVLLDTDFQFDPQSDYANLSPVDLEGCKKYVMDDCNVVAATFNATSSTCAKKRMPLVNARKSSSSKGQIALLKVPNDNSNESGRFKGSKKKIFDVRVFLKVMLAVSSTLACLFGALAVYYHPLAQRLMRRKKFLYASAIGINFREFTFQELHEATGGFSKTIGKGSSGKVYTGNLAIDDAEVAIAVKKLETKIERNEQEFMTELKIIGRTHHKNLVRLLGFCIEKSHRLLVYELMPNGALSNFLFGQREKPHWGQRIDIALGIARGLLYLHEECETQIIHCDIKPQNVLLDANYTAKIADFGLSKLLNKEQTRTNTNFRGTIGYIAPEWLRSAPISAKVDVFSFGIMLLEIICCRRHVQSNQEDEEESQEDDTVLAKWVLRCMICKKLEEVVGHDSEVLSDFQRFEQMALVGLWCIHPNAALRPTMKQVNQMLEGTMLVGVPPLLHQQMTADQSL 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2085 794 Pfam Protein kinase domain 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2085 794 ProSiteProfiles Bulb-type lectin domain profile. 28 144 IPR001480 -
Dere03g2085 794 SMART blect_4 34 146 IPR001480 -
Dere03g2085 794 Gene3D - 146 285 - -
Dere03g2085 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 782 - -
Dere03g2085 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 779 - -
Dere03g2085 794 Pfam S-locus glycoprotein domain 241 309 IPR000858 GO:0048544
Dere03g2085 794 SUPERFAMILY Protein kinase-like (PK-like) 474 773 IPR011009 -
Dere03g2085 794 Pfam D-mannose binding lectin 81 159 IPR001480 -
Dere03g2085 794 CDD STKc_IRAK 501 774 - -
Dere03g2085 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 203 IPR036426 -
Dere03g2085 794 Gene3D Phosphorylase Kinase; domain 1 474 573 - -
Dere03g2085 794 Gene3D Transferase(Phosphotransferase) domain 1 574 777 - -
Dere03g2085 794 SMART serkin_6 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2085 794 PIRSF SRK 1 793 IPR024171 GO:0004674
Dere03g2085 794 ProSitePatterns Protein kinases ATP-binding region signature. 501 527 IPR017441 GO:0005524
Dere03g2085 794 Gene3D - 21 145 IPR036426 -
Dere03g2085 794 FunFam S-receptor-like serine/threonine-protein kinase 464 573 - -
Dere03g2085 794 ProSiteProfiles Protein kinase domain profile. 495 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2085 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2085 Dere-ChrDere03 33062248 33064632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2085 474 774 Receptor kinase-like Gene Family AT5G45780 39.869 1.74e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere03g2085 Pkinase 9.7e-52 CL0016