Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2053 ATGACGATTGTAGAGAGCATTGTCAGTCTGTTTCTTCTCATTATGCTTCTTCTCATCATCGGCCTCGTCTTCCTGGCCTGTAAACCTTGGCGCTTCCTTTTCTCTTCGCGTTCTCCTTCATCCGTCAAGGCTGATGACCTTGAGAGGCCCCTTGTCTTAGATGATGCAAATGTGGTACATAACCAGATCAATGAATTTCCAAGAGACTATGATCTTGAAGGTGCTTCCTTCCCCAGTGAAGGTCATTTTTGCCCACCACTACCCCCTGGACTTATTTATAAGCAAAGACTTACTTCTGCTTCTCACCATGTGTCTCAAGGTGATAATTTGGTTTTAGATGTGATGTCTGATCCTTCAGAAGATGTTGCTGTTGGTCAGACCCTTAAGCTATCCCCAGCCCAGTTGGCAGAATTTCAAAAGCATAGTAGAAGCTTTGAAATTGGTAGACTGCAAGACTTTGTACATAGAGATATATTAGATCAAAGAAGTTGCCTCACTTTGGAGGTTATCTCTGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAGTCAACAATTCCCTCAAAGCTACCACTGACCTTGGGAAGAGTTTCTCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCTGGAAAGCATGCCCTAATAAACTGGAATTTGGATAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACATTTTTGAATTCTCAACCAATCAACCATTTAGACGCTGGAAGCAGGCATTGGAGCAATCCAGTTGAGCTTGCTAATGGAGACATCATAACACTTGGGACAACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAGGATCCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTATGCGTCGAGGAGGGAAAAAACTGGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGACTGGATCAGTTTGGACTATTTGGAATTTGTGATGGGCATGGTGGAGATGGGGCTGCTAGATCTGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTATCGGATTCACTAGAAAGAGAGAATGTTGTATCACTCTGTGATGCTTCAAATGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCATGAATCACTATTATGAGGGATGTACAGCAACAGTGCTTCTGGTCTGGGCTGATGGTGACGAAAATTTCTTTGCACAATGTGCAAATGTCGGAGACTCTGCCTGTGTTATGAACATTGATGGGCAAGAAATCAAGATGACAGAAGATCATAAGATAACAAGTTATTCTGAAAGGATCCGAATTGAAGAGACAGGCGAACCTTTGAGAGATGGGGAAACACGTATATATGGCATAAACCTTGCACGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCTCGTTTCAGTTCAGAGCCTTATATAAGTCAAGTTGTGCACATTGATCAGGCAAGCAGGGCTTTTGCCATACTAGCAAGTGATGGGCTATGGGATGTCATCAGCGTGAAGAAGGCAATTCAGCTAGTGCATCAGATGAGGGAGAAATACTCCACGGATAGAGAGAATTCGGCAGAAAAGATTGCAAATTTCTTGTTGAGTGAGGCTAGAACACTCAGAACAAAGGATAATACTTCTGTAATTTTCTTAGATTTTGATACCTTCCCAAGATTTTCTTGTAAAGCTGAGTCTTAA 1716 0.4155 MTIVESIVSLFLLIMLLLIIGLVFLACKPWRFLFSSRSPSSVKADDLERPLVLDDANVVHNQINEFPRDYDLEGASFPSEGHFCPPLPPGLIYKQRLTSASHHVSQGDNLVLDVMSDPSEDVAVGQTLKLSPAQLAEFQKHSRSFEIGRLQDFVHRDILDQRSCLTLEVISGPSCGLRCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLDKMKWELVDMGSLNGTFLNSQPINHLDAGSRHWSNPVELANGDIITLGTTSKVIVHITSQNRIHIPFGVGMASDPMSMRRGGKKLAMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAARSASKLFPEIVANILSDSLERENVVSLCDASNVLRDAFSQTEACMNHYYEGCTATVLLVWADGDENFFAQCANVGDSACVMNIDGQEIKMTEDHKITSYSERIRIEETGEPLRDGETRIYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAILASDGLWDVISVKKAIQLVHQMREKYSTDRENSAEKIANFLLSEARTLRTKDNTSVIFLDFDTFPRFSCKAES 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2053 571 ProSiteProfiles PPM-type phosphatase domain profile. 287 559 IPR001932 -
Dere03g2053 571 SMART FHA_2 190 242 IPR000253 GO:0005515
Dere03g2053 571 ProSitePatterns PPM-type phosphatase domain signature. 324 332 IPR000222 GO:0043169
Dere03g2053 571 Gene3D - 295 565 IPR036457 -
Dere03g2053 571 PANTHER PROTEIN PHOSPHATASE 2C 283 556 IPR015655 GO:0004722|GO:0006470
Dere03g2053 571 FunFam Protein phosphatase 2C 70 295 566 - -
Dere03g2053 571 FunFam Protein phosphatase 2C 70 160 294 - -
Dere03g2053 571 Gene3D - 160 294 - -
Dere03g2053 571 Pfam Protein phosphatase 2C 295 552 IPR001932 -
Dere03g2053 571 CDD PP2Cc 295 559 IPR001932 -
Dere03g2053 571 ProSiteProfiles Forkhead-associated (FHA) domain profile. 191 242 IPR000253 GO:0005515
Dere03g2053 571 CDD FHA_PP2C70-like 165 275 - -
Dere03g2053 571 SUPERFAMILY PP2C-like 300 561 IPR036457 -
Dere03g2053 571 SUPERFAMILY SMAD/FHA domain 163 274 IPR008984 GO:0005515
Dere03g2053 571 SMART PP2C_4 281 557 IPR001932 -
Dere03g2053 571 Pfam FHA domain 192 267 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2053 Dere-ChrDere03 32644790 32655651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2053 6 561 PP2C-type Phosphatase Gene Family AT5G19280 60.342 0.0 674