Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2051 ATGCAAGAATTTCTGGGTTCAGTTCGCCGATCCTTGGTTTTCAGAAGCCCAGGTGGGGACGATGGAGGGTTTGGTGTTGGCGGTCTGGTTGATAAGATTGGATCCAGCATTCGTAAATCACGAATTGGGCTCTTCTCTCAACCACGTGTTAGGGCTCTGCCGCCGGTCCCGAAGGACAACGCTACTTCGATCCGGTGGCGGAAGGGTGAGTTGATTGGTTGTGGTGCCTTCGGTCGAGTCTATATGGGAATGAATCTTGATTCTGGGGAGCTTATTGCTGTCAAGCAGGTTTTAATCGCGGCTAGTAGTGCTTCGAAAGAGAAAACACAGGCTCATATTTTGGAGCTTGAAGAAGAAGTGAAGCTTCTGAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGGACTGCTAGGGAGGAGGATTCCTTGAATATTCTGCTGGAATTTGTACCTGGAGGATCTATTTCATCGCTCTTGGGGAAACTTGGATCCTTCCCTGAGTCCGTTATAAAAAGGTATACAAAACAACTCTTAGTGGGCCTTGAATACCTTCACAAGAATGGAATTATTCACAGGGATATAAAGGGTGCAAACATTCTTGTTGATAATAAAGGATGCATAAAACTTGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATAAATGGTGCAAAATCAATGAAGGGTACTCCATACTGGATGGCTCCTGAAGTTATTCTGCAAACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTTGGATGTACCGTGATAGAGATGGCAACAGGGAAGCCTCCATGGAGCCAACAGTATCAGGAGGTTGCTGCTCTTTTCCATATTGGGACAACTAAATCTCATCCGCCCATACCTGAACATCTCTCTGTTGAGGCAAAGGATTTTTTGTTGAAATGTTTACAGAAGGAACCAGATTTAAGGCCTTCTGCATCAGATTTGTTAGAGCATCCATTTGTCACCTGCGAGTGTCAGGAATTTAATCCCATGTTACGCAGTTCAGTTGTGGAATCTTGCAAGCAGATGGCAACATCTGGGATGAACTCTAGAAACTTAGGACCAGGCCTCAAGGATTTTTGTCAGATGGATAGCATAAGAAGCTCAATCGTGCATCCTGAAACTCATTTAAAATCAGGTTTCTACCAAGGATACCAAGGAGCGGGCAGTTATGATGATGACATGTGTCAGATAGATGATAAAGATGATCTTTTTGTCGATGCATCAGCAAATTCTAAGTCTCTCTTTTCATCACGTGACGTAAAGAGTTTTAACCCTATGTGTGAACCTATGGATGACGATGATGAAGAAGTTACGGAGTCTAAAATTAGAGATTTTCTAGATGAGAAGGCTTTGGAACTGAAGAAACTCCAAACTCCTCTTTATGAAGAATTCTTTAGCATATCAAATGCAGCTGTTCCTCCAGCACCTGTTTCAATTGCATGTACTGAACTTGTATCAGATGTCTCAAATGTAACGCCAAAAAGCAGGTCACCTAGTCAGGCTAGTAGACGATTCTCGGTGGCTGATGGTCCTAATATTGCATGGCATGGAAGTCATAACAAAAATAAATCTAAAATTAGTGATGCAAATAGTCGACCTTTGCAGGAAATCCATCCATCTGAGCTTAATGAATGGAAAGAGAGTCTTCATGATGCTCAACAAGAATCATTTAGTGTTAGCTCAAGCTTCTCTGAAAGACAAAGGAAATGGAAAGAAGAACTAGTTGAAGAGCTTGCGAGGAGGCGTGAGATGATGCGCCTATCAGGCTTAGGAGGTAGGATAACGTCTCCAAATGATCGCAATATTCATAAACAGACAGATCCGTTACGCTTTGCATTTCCAGGCTAG 1872 0.4279 MQEFLGSVRRSLVFRSPGGDDGGFGVGGLVDKIGSSIRKSRIGLFSQPRVRALPPVPKDNATSIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAASSASKEKTQAHILELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKLGSFPESVIKRYTKQLLVGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEHLSVEAKDFLLKCLQKEPDLRPSASDLLEHPFVTCECQEFNPMLRSSVVESCKQMATSGMNSRNLGPGLKDFCQMDSIRSSIVHPETHLKSGFYQGYQGAGSYDDDMCQIDDKDDLFVDASANSKSLFSSRDVKSFNPMCEPMDDDDEEVTESKIRDFLDEKALELKKLQTPLYEEFFSISNAAVPPAPVSIACTELVSDVSNVTPKSRSPSQASRRFSVADGPNIAWHGSHNKNKSKISDANSRPLQEIHPSELNEWKESLHDAQQESFSVSSSFSERQRKWKEELVEELARRREMMRLSGLGGRITSPNDRNIHKQTDPLRFAFPG 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2051 623 MobiDBLite consensus disorder prediction 497 514 - -
Dere03g2051 623 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2051 623 Gene3D Transferase(Phosphotransferase) domain 1 64 359 - -
Dere03g2051 623 Coils Coil 106 126 - -
Dere03g2051 623 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2051 623 CDD STKc_MAPKKK 65 328 - -
Dere03g2051 623 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Dere03g2051 623 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 334 - -
Dere03g2051 623 FunFam Mitogen-activated protein kinase kinase kinase 2 65 356 - -
Dere03g2051 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Dere03g2051 623 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Dere03g2051 623 MobiDBLite consensus disorder prediction 497 536 - -
Dere03g2051 623 FunFam Serine/threonine-protein kinase STE11 62 156 - -
Dere03g2051 623 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2051 Dere-ChrDere03 32601190 32607691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2051 1 601 MAP Kinase Kinase Kinase AT3G06030 56.391 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere03g2051 Pkinase 6.5e-72 CL0016