Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2041 ATGATCATGAAGAAAGGCATGTTCGAGAAGCAACAGTCTCCTGAAGCTTCAAATTCTGCATCAAGCAGTAACCTCTCCATAGATGATGACAAGGAGATTGACTGCAGTGCTGCAATATCTAAGCAGCGATATATCTTGGTTCACAACTCTGCATTTCATTGTTGGCGCATCAAACTTGACCTAAATTCTGCTCGCATGGTCATAGCAGAGATGGTGGGTACTTTCATTTTGATGTTCTGTGTGTGTGGAATCATTGCAAGCACACAGTTCTTAAATGGACAAGTGGGTCTTCTGGAGTATTCAGCTACAGCAGGATTAACTGTGGTTGTGGTAATCTTCTCAATAGGGCCAATCTCATGTGCTCATGTTAACCCAGCCGCTACAATAGCTTTTGCAACATTGGGTCAATTTCCATGGTTAAAGGTTCCAGTTTACATACTGGCACAGATAGTGGGTTGTGTGTTGGCAACATATATTGGTAGCCTTGTCTATGGCATTAAATCAGATGTCATGATGACAAGGCCAGTCCAAGGGCCCGTCTCTGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATGATGTTTCTGGCTGCAGCCTTGACAAGTGAACTTCAATCAGTGGGTCATTTATCTGGCTTTGTTGTTGGAATAGCTGTTGCACTTGCAGTGTTAATCACAGGGTACTATCCACAAACTTCATGGATTTCTACAAACAGCTGTTGCAAATATCACAGATCTTATAAAGCTTGTCTCTTAAACCAAGATGGATTTCGCTTTTGTTGCAGCCCTGTTTCAGGTGGATCAATGAATCCTGCAAGATCATTAGGCCCAGCTATTGTGTCCTGGAAATTCAAGGACATCTGGATATACATCACAGCTCCCATTACTGGAGCTGTAGCAGGTGCTCTGTTGTTTCGCTTTCTACGTCTTAAGCACCAAACTTGCACTACTTTCTCCTCCCCAAGCACAAGTGATGGTGGCCATTCCATAACCTTGTGCCCAAGTTAG 1008 0.4355 MIMKKGMFEKQQSPEASNSASSSNLSIDDDKEIDCSAAISKQRYILVHNSAFHCWRIKLDLNSARMVIAEMVGTFILMFCVCGIIASTQFLNGQVGLLEYSATAGLTVVVVIFSIGPISCAHVNPAATIAFATLGQFPWLKVPVYILAQIVGCVLATYIGSLVYGIKSDVMMTRPVQGPVSAFWVELIATFIMMFLAAALTSELQSVGHLSGFVVGIAVALAVLITGYYPQTSWISTNSCCKYHRSYKACLLNQDGFRFCCSPVSGGSMNPARSLGPAIVSWKFKDIWIYITAPITGAVAGALLFRFLRLKHQTCTTFSSPSTSDGGHSITLCPS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2041 335 Gene3D Glycerol uptake facilitator protein. 22 320 IPR023271 -
Dere03g2041 335 MobiDBLite consensus disorder prediction 1 26 - -
Dere03g2041 335 PANTHER AQUAPORIN NIP2-1 260 317 IPR034294 -
Dere03g2041 335 SUPERFAMILY Aquaporin-like 259 314 IPR023271 -
Dere03g2041 335 MobiDBLite consensus disorder prediction 11 26 - -
Dere03g2041 335 SUPERFAMILY Aquaporin-like 64 230 IPR023271 -
Dere03g2041 335 Pfam Major intrinsic protein 62 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 Pfam Major intrinsic protein 261 305 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 PRINTS Major intrinsic protein family signature 251 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 PRINTS Major intrinsic protein family signature 288 308 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 PRINTS Major intrinsic protein family signature 65 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 PRINTS Major intrinsic protein family signature 104 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere03g2041 335 PRINTS Major intrinsic protein family signature 141 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2041 Dere-ChrDere03 32491863 32493494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2041 27 313 Major Intrinsic Protein MIP AT5G37810 31.250 1.98e-45 154