Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2022 ATGGGCCACAGCCATTTGCCCAATCCAAATGGACACGGGAAGTATCATCCTAAGGCATTCACCAGTTTTCTTCCTTTCTACTTAAAAATGAATATCGTCTCCGTCTCTGTCTGCCAACAAGTACAGCCCCTATCGAATTTCCAAAGGGGACTCACCATGGACCCTTTCTTCCCTCACCACCGTAAGGACAAGGCGATTGTCATACTCGGCGCCACCGGCACCGGCAAGTCCAGGCTCGCCATCGACCTTGCCACCTGCTTCCCGCCCGCCGAAATCGTTAACTCCGACAAAATGCAAGTCTACAATGGCCTCGATATCACCACTAACAAGGTCACCGAAGAAGAATGCCGCGGCGTCCCGCACCACCTGCTCGGAATCGCTGACCCCAACTCCAATTTTACCGCCGATGACTTCACCCGCCACGCCTCCTCCGCCATTGACTCCATCGTCCACCGAGATTGCCTTCCTATCGTCGCCGGCGGCTCCAATTCCTACATCGAGGCCCTTGTCGAAGACGACGCTGCGTTTCGGTTGAAGTACGAGTGTTGCTTCCTCTGGGTGGACGTATCCCCGCCTGTCCTGGATTCCTTCCTCTGGAAGCGGGTCGATCGGATGATCGAAGCGGGACAAGTCGAAGAGGTCCGTCAATTCTTCGACCCGGCCGGGGATTACTCGACGGGAATCAGAAGGGCCATTGGAGTGCCTGAATTTGATGAATTTCTTCGAACAGAAGCTACGGCCGATGAAAGAACCAGGAAGAGGTTACTAGAGGCTGCCATTGCGAAGATCAAACACAACAATTGTGCGCTAGCTCACCGTCAGCTTCACAAAATTCGTCGACTTCACAACATGTGGAAGCGAAGCATGTATCGCCTCGACGCCACCGACGCCTTTCAAAAAAGCGGCGATGAAGCAGAGGAGGCGTGGGAGACTCACGTGGTAGCCAAAAGCCAGAGGATTGTGCACAAGTTCCTCTACGGGGAAACTACGGTGGTTCCGGCCACCGCTGTAATGCCTGCAGTGCCGCCGCCGCCGAAGCAGGTGGCCGTAGCCGCCGTCACTCATTAG 1068 0.5515 MGHSHLPNPNGHGKYHPKAFTSFLPFYLKMNIVSVSVCQQVQPLSNFQRGLTMDPFFPHHRKDKAIVILGATGTGKSRLAIDLATCFPPAEIVNSDKMQVYNGLDITTNKVTEEECRGVPHHLLGIADPNSNFTADDFTRHASSAIDSIVHRDCLPIVAGGSNSYIEALVEDDAAFRLKYECCFLWVDVSPPVLDSFLWKRVDRMIEAGQVEEVRQFFDPAGDYSTGIRRAIGVPEFDEFLRTEATADERTRKRLLEAAIAKIKHNNCALAHRQLHKIRRLHNMWKRSMYRLDATDAFQKSGDEAEEAWETHVVAKSQRIVHKFLYGETTVVPATAVMPAVPPPPKQVAVAAVTH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2022 355 FunFam Adenylate isopentenyltransferase 5, chloroplastic 191 289 - -
Dere03g2022 355 Gene3D - 62 325 IPR027417 -
Dere03g2022 355 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 62 325 IPR039657 -
Dere03g2022 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 173 IPR027417 -
Dere03g2022 355 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 191 289 - -
Dere03g2022 355 Pfam IPP transferase 179 279 - -
Dere03g2022 355 Pfam IPP transferase 99 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2022 Dere-ChrDere03 32322280 32323911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2022 179 329 C2H2 Transcription Factor Family AT2G27760 29.213 2.04e-18 84.3