Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1972 ATGAAGATGAGGTCCTTCTTCCATGTTGCCTTCTTTGTTTGTTTTCTAATGTTAACAATTGGTGTGTGTAATGGAGGGAAGCTCAAGTTTCTTCATCACAAGAAATGCCAGGAGGCCCAGAAAATAGTGAGAAATATCATATGGAGGAAGGTTGAGAATGATCCTACATTAGCACCCAAGCTCCTTAGGCTGCATTACCATGACTGTTTTGTGAGGGGTTGTAATGCATCAATATTATTGGACACAGCAGGAGGGAATACAAGTGAGAAAGAAGCAAGGCCAAACAGATCCTTATCAGGATATGAGATCATTGATGAAGTGAAAGCTAAATTAGAAGAAAAATGCCCAGGCATTGTGTCTTGTGCTGATATCTTGGCTTTGGCTGCCAGAGATGCTGTTTCTTACCAATTTGGGATGTCCATCAATGGCCTCAATTTGGTTGATCTTGTGACTTTATCAGGGGCACATACAATTGGAGTTGCACACTGTGTGGTGTTTCAGAGAAGGCTATACAATTTCACAGGAAAAGGGGATACAGATCCTGCCCTTGATCGAGCATATGCAGAAATCTTAAAGAAAATGTGTTCCAACAACCCTCCTAATCCAAACTCTACAGTGGAAATGGATCCAAACAGCTCAATTTCCTTTGATAATCATTATTTTGTGGCTCTCAACAAGAACCAAGGTCTTTTTCAATCTGATGCAGCGTTGCTCACCAACAGAATTTCCAGGTTAATAACAAGGAGATTCCAGAATAGCCAAACTTCTTTCTTCAATCGGTTTGCTCGTTCCATGGTGAAAATGAGTGAGATTGGAGTAAATAAAGGTGATCATGGGGAGATTAGGAAGAATTGCAGAGCCATTAATTGA 870 0.4057 MKMRSFFHVAFFVCFLMLTIGVCNGGKLKFLHHKKCQEAQKIVRNIIWRKVENDPTLAPKLLRLHYHDCFVRGCNASILLDTAGGNTSEKEARPNRSLSGYEIIDEVKAKLEEKCPGIVSCADILALAARDAVSYQFGMSINGLNLVDLVTLSGAHTIGVAHCVVFQRRLYNFTGKGDTDPALDRAYAEILKKMCSNNPPNPNSTVEMDPNSSISFDNHYFVALNKNQGLFQSDAALLTNRISRLITRRFQNSQTSFFNRFARSMVKMSEIGVNKGDHGEIRKNCRAIN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1972 289 PANTHER PEROXIDASE 25-RELATED 16 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 Gene3D - 33 140 - -
Dere03g1972 289 FunFam Peroxidase 131 268 - -
Dere03g1972 289 Gene3D - 269 289 - -
Dere03g1972 289 ProSiteProfiles Plant heme peroxidase family profile. 25 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 SUPERFAMILY Heme-dependent peroxidases 32 289 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 Gene3D Peroxidase, domain 2 142 268 - -
Dere03g1972 289 CDD secretory_peroxidase 32 288 IPR033905 GO:0004601|GO:0042744
Dere03g1972 289 Pfam Peroxidase 142 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 Pfam Peroxidase 44 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Plant peroxidase signature 263 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Plant peroxidase signature 223 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Plant peroxidase signature 207 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 ProSitePatterns Peroxidases proximal heme-ligand signature. 148 158 IPR019793 -
Dere03g1972 289 PRINTS Haem peroxidase superfamily signature 148 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere03g1972 289 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1972 Dere-ChrDere03 31790462 31793793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1972 26 289 Peroxidase AT2G39040 53.896 6.24e-103 303