Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1967 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGTCATTGCTGAAAAGAAGATGGAAAGCAAAGATTTTACAGGGGCTCGTAAAATTGCTCTAAAGGCTCAGCAACTTTATCCTGATCTGGAGAATATAGCTCAAATGCTTATTGTATGTGATGTGCATTGCTCTGCCGAGCAGAAATTATTTGGTAATGAGATGGACTGGTACGGAATTCTTCAAATTGAGCAGACAGCTGATGAGTCAACAATAAAGAAGCAATACAGGAAGTTTGCTCTTCAACTTCATCCTGACAAGAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTAATTGGGGAAGCTCAAAGAGTGCTTTTGGACAAAAATAAACGGGCTCTGCTTGACATGAAGTGCAAAGTTACTATGAACAGAACTGCTAAGCCGTATCGTCCGGCACAGAAGGTTCATACAAATGTGAATGCTGGCATGCAAAACAATGTCAGGGCCAATTTTTCAAACTTGAATCCTCAGCAGCAGCAGCAGCAGCCTAGGCAGTCAACTCAGCAGGCCCCCAATGGTACCCGCCCTACATTTTGGACTGCCTGTCCTTTTTGTTCTCATAGATATGAGTTTAAGAGAGAAGCTATTAATAGATCTTTTTGCTGTCAAATTTGTAATAAGCCCTATATTGCAACTGATGTGAATGTGCAAGGTACATCACCAGCAGCTAATTCAAGTCGGCAAGCTTTTTGCCGACAGAAAGATGGTTTAAATCAAGGTGCTGTTAAGGTGGATATTGGATCTCACGGTAATTTAAATGCTAAGAATTTCAATACAAAGCCTTGTGAGAAAAAAGGTCCCAATGTCTCTGATAAGCCGAATGGAAAGAGAAAGAGGAAGTGGGTAGCAAAATCAAGTGAAAGTTCTGATTCTATGGACAGCAGTGATTCTGAAGACAATATGTTTGTTAATGAGGATGGTGTTCCTGGTGGACAAAACCATCCAACTTACCGAGAAGAACATCCACGTAGATCTACACGACCAAAGCCGCAGGTTATTTACAAGGAGAATGTGAGTGATGATGATGACAACAACAACTTTTCAAAGCCTTCAACAAGGGTCAAGGAAGGTGGTTCATCATGTGTTGCTGAAGAATATCATGGGGAGACAGCTAAAACGAATAATCAGAATGGTTTAGCTGCTGATCCAAAAGATGATCAGAAAGAGGCGAAACAGAAGCACAGTCTATATTCTGAAGATAGCTTACACAATAAAAATGAGGAAAGTTTGGGCACAAGGGGAAAAGAAGCAGTGCGGTGCTCAAAGGGGACAGGTGAAGCCTCTGAGCATGCTACATCAGATTCAGCCTCTGGAGCCACGGAGGCTCCAAATATTTACATCTGTCCCGATGCAGAGTTCAGTGACTTTGAACATGATAAGAGAGAAGAGTGTTTTGCAAATGGGCAGATTTGGGCTATATATGACACAATTGATGGGATGCCTAGATTCTATGCTCTAATCAGAAAAGTTCTCTCTCCCGGGTTCCGGCTGCGGATAACATGGTTTGAATCGGAGCCAGATGACATGGATGAAATCAAGTGGGTAGAAAAGTTGTTGCCAGTTGCTTGTGGGAAGTATGTGCTTGGTAACACTGAAACTACAGAAGATCGGCTCATGTTCTCGCATCTGATTCTGTGTGAAAAGATTGGCCACAATACTTTTAGAGTTTATCCTAGAAAGGGAGAAACTTGGGCTCTGTTTAAAAACTGGGATATCAAATGGTACACTGATGTGGAATCTCATCAGAAGTATGAATTTGACTTCGTTGAAATTTTGTCAGATTATGTTGAAGGTGAGGGTGTATCTGTTGCGTACTTGGATAAGTTGGAAGGTTTTGTGAGTCTCTTTTCTCCAACTAAGAAGGACGGTATGGACTCGTTTCAAATTCCACCAGTGGACTTATTTAGATTCTCTCACAGGGTTCCGTCTTTTAAGATGACTGGTCATGAAAGATTAGGCATTCCTAAAGGGTCTTTTGAACTTGATCCTGCTGCTTTGCCTACAAATCTTGAATAG 2055 0.4175 MDCNKEEALRAKVIAEKKMESKDFTGARKIALKAQQLYPDLENIAQMLIVCDVHCSAEQKLFGNEMDWYGILQIEQTADESTIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDKNKRALLDMKCKVTMNRTAKPYRPAQKVHTNVNAGMQNNVRANFSNLNPQQQQQQPRQSTQQAPNGTRPTFWTACPFCSHRYEFKREAINRSFCCQICNKPYIATDVNVQGTSPAANSSRQAFCRQKDGLNQGAVKVDIGSHGNLNAKNFNTKPCEKKGPNVSDKPNGKRKRKWVAKSSESSDSMDSSDSEDNMFVNEDGVPGGQNHPTYREEHPRRSTRPKPQVIYKENVSDDDDNNNFSKPSTRVKEGGSSCVAEEYHGETAKTNNQNGLAADPKDDQKEAKQKHSLYSEDSLHNKNEESLGTRGKEAVRCSKGTGEASEHATSDSASGATEAPNIYICPDAEFSDFEHDKREECFANGQIWAIYDTIDGMPRFYALIRKVLSPGFRLRITWFESEPDDMDEIKWVEKLLPVACGKYVLGNTETTEDRLMFSHLILCEKIGHNTFRVYPRKGETWALFKNWDIKWYTDVESHQKYEFDFVEILSDYVEGEGVSVAYLDKLEGFVSLFSPTKKDGMDSFQIPPVDLFRFSHRVPSFKMTGHERLGIPKGSFELDPAALPTNLE 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1967 684 Gene3D DnaJ domain 64 186 IPR036869 -
Dere03g1967 684 MobiDBLite consensus disorder prediction 278 299 - -
Dere03g1967 684 MobiDBLite consensus disorder prediction 395 436 - -
Dere03g1967 684 MobiDBLite consensus disorder prediction 439 453 - -
Dere03g1967 684 Pfam Domain of unknown function (DUF3444) 458 663 IPR024593 -
Dere03g1967 684 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Dere03g1967 684 SMART dnaj_3 66 123 IPR001623 -
Dere03g1967 684 MobiDBLite consensus disorder prediction 168 187 - -
Dere03g1967 684 CDD DnaJ 67 120 IPR001623 -
Dere03g1967 684 PRINTS DnaJ domain signature 69 87 IPR001623 -
Dere03g1967 684 PRINTS DnaJ domain signature 103 123 IPR001623 -
Dere03g1967 684 PRINTS DnaJ domain signature 87 102 IPR001623 -
Dere03g1967 684 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 684 - -
Dere03g1967 684 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Dere03g1967 684 MobiDBLite consensus disorder prediction 329 362 - -
Dere03g1967 684 MobiDBLite consensus disorder prediction 260 454 - -
Dere03g1967 684 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1967 Dere-ChrDere03 31765443 31767497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1967 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 8.99e-29 116