Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1961 ATGAACCAGTACCACATCTACGAAGCCATTGGTCGCGGCAAATACTCGACTGTGTATAAAGGCCGGAAGAAGAAGACCATTGAATATTTTGCCATTAAGAGTGTTGATAAGTCACAGAAAAGTAAAGTTCTTCAAGAAGTTAGGATTCTTCACTCTTTAGATCACCAAAATGTACTCAAGTTTCATTCTTGGTATGAAACTTCTGCTCACATATGGTTGGTTTTGGAGTATTGTGTTGGAGGAGATCTGCTTTCCTTATTACAACAGGATAATCATCTACCTGAAGATTCAATTCATGATCTTGCTCATGACCTAGTCAAAGCTTTGCAGTATTTGCATTCAATTGGAATAATATATTGTGATTTGAAACCATCAAATGTCCTACTAGATGAAAATGGATGTGCAAAGTTATGTGACTTTGGTTTGGCTAGAAAATTGAGAGATATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCCTATTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGATTTTTGGGCCCTGGGTTGTGTACTATATGAATGTTATGCAGGGAGACCACCCTTTGTAGGAAGAGAATTCACTAAACTTGTAAAATCCATCATTTCAGATCCAACTCCACCACTTCCAGGTAATCCAAGTCGCCCTTTTGCCAATTTGATTAATTCTCTGTTGGTAAAAGATCCAGCTGAAAGAATACAGTGGCCGGAGCTTTGCGGACATGCCTTTTGGAGAACCAAACTAAATTTGGTGCCTTTACCTCCTCAACCTGCTTTTGATGATATGATAGAATTGCATGCTAAACCATGCTTATCAGAACGCAATGGTGATAAACCTTCCCAGAACAGAACTCCTCCCAAATATCGTGAAAAAGATGTGAGAGGGTTGTTGAAGCAGGATGAGAATTCTATTCTGGGACCAAGGGGCATTGAGACACCTACTAGGGGTACACCAAATGGACATAGAATTCAGACAAAGGGTTCTGGCAGAACAGCTGAGGTGAAGCAGAAAAATCCTTCCAATGCTAGCAAGGCTGTGAATCTATTGAGGCTCTCAAGGATAGCAAAATCAAATTTACAGAAGGAAAATGAGAAGGAAAATTATCGACGGCCCTTGCCTAATAACTCTGAGAATGACGCTGAAGTTAAAATTGAGAATGCTGATATGGAGCTTGATTTTAATGAAAATACAGAGGATGATGCACATGATGAAACTGATGGTTCTGATCATACAAATTCTGTGCCAGATGAGAAACTGTCCAATCTAAATCAAAATCAGGGGAAAGCAGACGAGATGGAAAGTAATGTACATCAGCTAGACACCCCCTCTGTTGTCAACACACCCATCTCAGATGATTCAAGGTCCTTTGATCAGGAATCAACTTCTGAGCATCCTGACATGTCTACTATCTCTCCCAGTGTGAGTCCTCAAATCAAGAAACATAGAGTTAAAGAAGACTTGGTTTCTGCCCTTGACTCTGATTCTTCAAGGTCATCTGGTAACATTTCCCAGGTTCTTTGGCATCAATCTGATCTTTCAGTCAGACCTGTAATGCCAAGCAGAAAAATTGATAAAAATTCAGAAGTCATCCCTTCACTTCCTTTTGAGGCTTTGCCTGTGTCTGATTTTGTAAAGATGTCTAAAGAACAATTGGATGCAGTCCACAACCGAATTATAGCAATTTTCAATGGGAATTCCGGCATTGGGGAGAAGCAGAATGTCATTAGATACTTAGAAATGTTGAGCAGTAACGCTGATGCTGCTAATATTTTAACAAATGGGCCAATAATGCTCATGCTTGTAAAATTGCTTCGTCAGTCCAAGGCTTCAGCTTTGCGTGTTCAACTTGCTTCACTGATTGGTCTATTGATTCGGCACTCTACATATATTGATGATAGTTTGGCTAATTGTGGAATTTTAGGTTCACTGACTGATGGCCTTAGAGACAAGCAGGACAAAGTGAGGAGGTTTTCGATGGCTGCTTTGGGTGAGTTGTTATTCTATATATCTACTCAAAATGAGGACAGTAGAGATAACAATCACCTTGAATCTCCATCAAAGGATAGTCGGGCCACATGTGGCTGGCAGGTTCCAAATTCATTGATATCTTTTGTGTCTTCACTTTTACGTAAGGGAGAGGATGATATAACTCAATTGTATGCATTGAGGACAATTGAGAATATTTGCAGTCAAGGAGGGATGTGGGTGGGACGTTTTGCCAGTCAAGATGTCATTTGTAATCTTTGCTATATATATAGGGCAGCAGGGAAACAAGAGAGCATGAGGCTTACTGCAGGATCATGTTTGGTGCGCTTAGTTCGTTTTAATCCTCCTAGCATTCAGCCAGTTATAGAGAAACTCTCATTCAAAGACCTGGCATCAGCTCTCGTCAAGGGCAGTCCTCGTGAGCAGCAAATCAGCTTAAATCTTCTGAACATGGCAATGCTTGGAAGTCACATGCTCACTAATATTGGAAGATACCTTCTACAACTTGTTGAGGATAAGAATTTGATCCCAAGTCTTTTGGCTCTTGTTGAGCAGGGCAGTGAAGTTTTGAAGGGAAAGGCGCTTGTCTTTGTGGCTCTTCTCTGTAAGGGTGGTAGAAGGTGGCTTCCACACTTTTTTTGCAGTCCAAAGTTACTTTCAGTGGTGGACAGGCTGGGAAAAGAGAAGGATGCCTATGTGCGGCAGTGTTTGGATGCATTCTTGCATATTGTAGCCTCTACTATTCCAGGTTTACTGGATACTATAACCTGTGATATCCAGCAAATGATAGCAGGAAGGCGCCATGGACATATCTCTTCCCTTACCAGCAGGTCTGCTCCAAAAACCAACATTCATTTGTTTCCTGTTGTGCTTCATCTTCTTGGGAGTTCAACATTTAAGCACAAAGTGGCGACTCAACAAATCTTGCTGCAGTTGGCAAACCTTATTAAAATCGTGGAGACACCATTTCAGGGCAGAGATGATTTCCAAATAACCCTTCTTCGAATTTTGGAGTCTCTCACAGAAGAGTCTTCTGTGATTTTTGGGAACCCTGACATTTTCATAAGTGAAATCCTCCCCAGTTTAACCATTTTGTACAAGGGTAACAAGGACGGTGATGCCAGATTTTTGTGCCTTAAGATTCTTTTTGACGTGATGGTCATTCTTTTGAGTGAACCAACTGAAGATGAGCAAAGATTGAAGGACTTGAAGTTCGTATCAAACACCCGTTTTCTCTCTCTCTACCCGACCTTGATTGAAGATGAGGATCCTATTCCTATGTATGCACAAAAGCTTCTTGTGATGTTACTAGAGTTCAATTTTATTACAATTCCAGACATTCTGCATCTGAAGACAATCTCACAATGCTTTGAGTTCTTGCTCGGTGATCTCTCAAATGCGAATGTTAATAATGTGAAGCTGTGTTTGGCTCTGGCTTCTGCTCCTGAAATGGATTCCAAGTTACTCTCTCAACTAAAAGTAGTTAGGAGGATTGGTAACTTTCTGGAGTTTGTATACGCAAAGGGTATGGAAGATTTTCTGGAGCCAACTCTTGGACTGTGCAGGGCTTTTCTTGCACGTTCAGTCAGCTGTGGAAATGGTTCTAGCTTCTCAGCAGAACCTACTCTCTTAGTTGAATGTTCTTCTGAGTTGAGTAATGCAGTTGATCCCCAGCAATGTGTAAGAGATATAATGGATTTTGGAAGCAATGTTGGTGTCTTGCTGGAGTTGAGTGGGTCTAATGAAGCCAACATTGCTGATATAGCTTCTGAATGTGTAATTTTACTGTTCAAGGCAGCTCCAAGAGAAGCCACCACTGGTCTACTAACCAAGCTCCCTAAGGTCAGTGTGATCTTAGAGTCCTGGCGCAAAGGCATCTCTCACTTATTGGTGCAACGAATGCTGCATGCTTTAGGTTACGCTTGCAGGCAGTACTTATTGCATGCAATGATATTATCAATATCCATACCAGAAATTTCAAGAATTGAAGTAATCGTTTCCGAACTTAAAAGTTCAGGTGTACATGACCTAGCCAAAACTGCTGGGCTGGCAGCTTTGGAATTGCAGCGGCTGCCTCGCTGCATCTAA 4113 0.4136 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRILHSLDHQNVLKFHSWYETSAHIWLVLEYCVGGDLLSLLQQDNHLPEDSIHDLAHDLVKALQYLHSIGIIYCDLKPSNVLLDENGCAKLCDFGLARKLRDISKVPSSSLPQAKRGTPYYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTKLVKSIISDPTPPLPGNPSRPFANLINSLLVKDPAERIQWPELCGHAFWRTKLNLVPLPPQPAFDDMIELHAKPCLSERNGDKPSQNRTPPKYREKDVRGLLKQDENSILGPRGIETPTRGTPNGHRIQTKGSGRTAEVKQKNPSNASKAVNLLRLSRIAKSNLQKENEKENYRRPLPNNSENDAEVKIENADMELDFNENTEDDAHDETDGSDHTNSVPDEKLSNLNQNQGKADEMESNVHQLDTPSVVNTPISDDSRSFDQESTSEHPDMSTISPSVSPQIKKHRVKEDLVSALDSDSSRSSGNISQVLWHQSDLSVRPVMPSRKIDKNSEVIPSLPFEALPVSDFVKMSKEQLDAVHNRIIAIFNGNSGIGEKQNVIRYLEMLSSNADAANILTNGPIMLMLVKLLRQSKASALRVQLASLIGLLIRHSTYIDDSLANCGILGSLTDGLRDKQDKVRRFSMAALGELLFYISTQNEDSRDNNHLESPSKDSRATCGWQVPNSLISFVSSLLRKGEDDITQLYALRTIENICSQGGMWVGRFASQDVICNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSIQPVIEKLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMLTNIGRYLLQLVEDKNLIPSLLALVEQGSEVLKGKALVFVALLCKGGRRWLPHFFCSPKLLSVVDRLGKEKDAYVRQCLDAFLHIVASTIPGLLDTITCDIQQMIAGRRHGHISSLTSRSAPKTNIHLFPVVLHLLGSSTFKHKVATQQILLQLANLIKIVETPFQGRDDFQITLLRILESLTEESSVIFGNPDIFISEILPSLTILYKGNKDGDARFLCLKILFDVMVILLSEPTEDEQRLKDLKFVSNTRFLSLYPTLIEDEDPIPMYAQKLLVMLLEFNFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMDSKLLSQLKVVRRIGNFLEFVYAKGMEDFLEPTLGLCRAFLARSVSCGNGSSFSAEPTLLVECSSELSNAVDPQQCVRDIMDFGSNVGVLLELSGSNEANIADIASECVILLFKAAPREATTGLLTKLPKVSVILESWRKGISHLLVQRMLHALGYACRQYLLHAMILSISIPEISRIEVIVSELKSSGVHDLAKTAGLAALELQRLPRCI 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1961 1370 MobiDBLite consensus disorder prediction 475 489 - -
Dere03g1961 1370 MobiDBLite consensus disorder prediction 330 360 - -
Dere03g1961 1370 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dere03g1961 1370 CDD STKc_ULK4 3 257 - -
Dere03g1961 1370 Gene3D Transferase(Phosphotransferase) domain 1 1 294 - -
Dere03g1961 1370 SUPERFAMILY ARM repeat 758 1279 IPR016024 -
Dere03g1961 1370 MobiDBLite consensus disorder prediction 296 311 - -
Dere03g1961 1370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Dere03g1961 1370 MobiDBLite consensus disorder prediction 370 385 - -
Dere03g1961 1370 FunFam Aurora kinase A 1 81 - -
Dere03g1961 1370 Gene3D - 567 919 IPR011989 -
Dere03g1961 1370 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Dere03g1961 1370 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1961 1370 MobiDBLite consensus disorder prediction 410 492 - -
Dere03g1961 1370 MobiDBLite consensus disorder prediction 427 468 - -
Dere03g1961 1370 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1367 IPR044591 GO:0000911|GO:0000914|GO:0008017
Dere03g1961 1370 MobiDBLite consensus disorder prediction 283 392 - -
Dere03g1961 1370 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1961 1370 SUPERFAMILY ARM repeat 582 919 IPR016024 -
Dere03g1961 1370 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1961 Dere-ChrDere03 31631950 31638923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1961 1 270 AGC Kinase Gene Family AT1G45160 33.333 4.72e-37 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Dere03g1961 Pkinase 7.7e-65 CL0016