Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1957 ATGGCTGTCGAAGCGTTAGTCACGAAATTAACGACATTGATGACCTCTGATCATGCTTCAGTGGTCTCAATGAACTTATTTGTAGCACTTCTTTGTGCTTGCATCATTATCGGTCATTTGCTGGAGGAGAACCGATGGATTAACGAATCCATCACTGCCCTTGTCATTGGTCTTTGTACTGGGATTTTTATACTGCTTTCAACTGGAGGAAAAAGCTCCCATATATTAGTTTTCAGCGAAGATCTTTTCTTTATTTACCTTCTTCCACCGATCATATTCAATGCCGGGTTCCAGGTGAAGAAGAAACAATTTTTTCGCAATTTTATGACGATCATGCTTTTTGGTGCAGTTGGCACTTTAATATCCTTTGGCATCATATCACTAGGGGCTATACACTTTTTCCCAAAATTGGATATTGGATCCCTCAAGCTTGGGGATTATCTTGCAATTGGGGCAATATTTTCAGCAACAGATTCTGTTTGCACTTTGCAGGTGCTTAATCAGGATGAGACACCTTTATTATACAGCCTGGTTTTTGGGGAAGGGGTAGTAAATGATGCGACATCTGTAGTGCTCTTGAAAGCAATTCAGAACTTTGATCTCGCTCACATCGACTTCATTACTGGTTTACACTTAATAGGAAATTTTTCCTATTTATTTATAGCAAGTACTTTGCTAGGAGCCTTGGCTGGATTGCTAAGCGCATTCATCATTAAAAAGCTTTATTTTGGCAGGCATTCTACTGACCGTGAGGTTGCTCTCATGATACTCATGGCCTACCTTTCATATATGCTAGCGGAACTATTTAATTTAAGTGCCATTCTGACCGTGTTCTTCTGCGGCATAGTCATGTCTCACTACACATGGCATAATGTGACTGAAAGTTCACGAGTAACAACCAAGCACGCTTTTGCTACTTTGTCTTTCATTGCTGAGATCTTTATCTTCCTTTACGTTGGGATGGATGCACTGGATATAGAGAAGTGGAGATTTGCCCGTCAAAGCCCTGGAAAATCAATTGGGATTAGTTCATTGCTGTTGGCACTTATCCTAGTCGGTAGAGCAGCCTTTGTTTTCCCTCTGTCCTTCTTAGCCAACTTACCCAAGAAGTCTCAATCCGAGAAAATCGAGTTAAAGCAACAAGTAACAATCTGGTGGGCTGGTCTAATGCGTGGAGCTGTTTCTATGGCACTCGCGTATAATCAGTTTACCAGGTTAGGCCATACTAAATTTCGTGAGAATGCCATCATGATCACTAGTACCATCACAGTTATACTCTTCAGCACCGTGGTGTTTGGGTTGATGACTAAGCCGCTTGTGAGGTTATTGCTTCCTCCATCAAAACACACGACCAGCATTCCGTCCCCACCATCTACTCCAAAATCGTTCATTGTGCCACTTCTTGGGAATGGCCAAGAATCAGAGGCCAATGGTGGTACACAGAATGGGCGTCCCCCAAGCAGCTTGCGTCTGCTCCTAAGCTTACCTACTCATGGCGTCCACCATTATTGGCGAAAATTTGACGATGCTATAATGCGACCTGTGTTCGGTGGGCGGGGTTTTGTACCTTTCGTACCTGGTTCACCCCTTGAACAGAGTGTCCACCAATGGCAATAA 1617 0.4304 MAVEALVTKLTTLMTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALVIGLCTGIFILLSTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFGIISLGAIHFFPKLDIGSLKLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLAHIDFITGLHLIGNFSYLFIASTLLGALAGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRFARQSPGKSIGISSLLLALILVGRAAFVFPLSFLANLPKKSQSEKIELKQQVTIWWAGLMRGAVSMALAYNQFTRLGHTKFRENAIMITSTITVILFSTVVFGLMTKPLVRLLLPPSKHTTSIPSPPSTPKSFIVPLLGNGQESEANGGTQNGRPPSSLRLLLSLPTHGVHHYWRKFDDAIMRPVFGGRGFVPFVPGSPLEQSVHQWQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1957 538 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere03g1957 538 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere03g1957 538 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere03g1957 538 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere03g1957 538 Gene3D - 18 446 IPR038770 -
Dere03g1957 538 NCBIfam sodium/hydrogen exchanger 3 23 444 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere03g1957 538 PANTHER SODIUM/HYDROGEN EXCHANGER 15 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Dere03g1957 538 Pfam Sodium/hydrogen exchanger family 27 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1957 Dere-ChrDere03 31603152 31606828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1957 5 536 Antiporters AT3G05030 74.488 0.0 812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1957 03 31603152 31606828 Dere03g1957 03 31603152 31606828 ECH