Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1944 ATGGCACATGCTTCTCCTCCTAATTACTTTGTCCGCCTGGAGAATACAACTTCCAAAGACGACTTATATTTGAGGAAGAGGACCAGGATGCGCCGGTGGCTTTGTTGTACATGTCAGGTTGAAGAGTCTTACCCATCTGAGAATGAGCACCTTAAAAGCCCAAGGAATTATGTGGATGGCAACCCAAAAGGTTCAAGGGCTTCAGCTCCTGTCAAACCTGAAACACAAAAGGCAGCACCACCTATTGAAGTGCCAGCATTAGCTTCAGATGAACTAAAGGAAATGACTGACAACTTTGGATCAAAGGCATTGATTGGCGAAGGATCTTATGGGAGAGTATATTATGCAACTCTAAACAATGGAAAAGCTGTGGCCGTGAAAAAGCTTGATGTTTCATCTGAACCTGAGTCCAATGTTGAATTTTTGACCCAGGTTTCCATGGTCTCAAGAATGAAGCATGATAATTTTGTTGAGTTGCATGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCAACTATGGGTTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAGCGAGTTAGAATTGCAGTTGATGCAGCAAGGGGGTTGGAATATTTGCATGAGAAAGTTCAACCACCTATTATACACAGAGATATTCGATCAAGCAATGTACTTATTTTTGAAGATTACAAAGCAAAGATAGCTGATTTTAATCTCTCAAATCAGGCCCCTGACATGGCTGCACGCCTCCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGTTGACTCAAAAAAGTGATGTCTATAGCTTTGGTGTTGTTCTTCTTGAGCTTCTGACAGGGAGAAAACCTGTTGATCATACCATGCCTCGTGGACAGCAAAGTCTTGTTACATGGGCTACTCCAAGGTTGAGCGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCAAAGCTGGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCGGAGTTTAGGCCAAATATGAGCATCGTGGTTAAAGCGCTGCAACCACTTCTGAAGGCTCCTCCTGCCCAAGCACCCGAAAATTGA 1176 0.4413 MAHASPPNYFVRLENTTSKDDLYLRKRTRMRRWLCCTCQVEESYPSENEHLKSPRNYVDGNPKGSRASAPVKPETQKAAPPIEVPALASDELKEMTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNVEFLTQVSMVSRMKHDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPAQAPEN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1944 391 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 33 385 - -
Dere03g1944 391 MobiDBLite consensus disorder prediction 45 78 - -
Dere03g1944 391 CDD STKc_IRAK 105 380 - -
Dere03g1944 391 FunFam PTI1-like tyrosine-protein kinase 3 62 175 - -
Dere03g1944 391 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Dere03g1944 391 Gene3D Transferase(Phosphotransferase) domain 1 177 388 - -
Dere03g1944 391 ProSitePatterns Tyrosine protein kinases specific active-site signature. 227 239 IPR008266 GO:0004672|GO:0006468
Dere03g1944 391 SUPERFAMILY Protein kinase-like (PK-like) 81 377 IPR011009 -
Dere03g1944 391 ProSiteProfiles Protein kinase domain profile. 99 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1944 391 Pfam Protein tyrosine and serine/threonine kinase 104 377 IPR001245 GO:0004672|GO:0006468
Dere03g1944 391 FunFam PTI1-like tyrosine-protein kinase 3 177 386 - -
Dere03g1944 391 SMART tyrkin_6 99 377 IPR020635 GO:0004713|GO:0006468
Dere03g1944 391 Gene3D Phosphorylase Kinase; domain 1 71 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1944 Dere-ChrDere03 31408040 31412291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1944 34 378 Receptor kinase-like Gene Family AT4G02010 45.402 1.98e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dere03g1944 PK_Tyr_Ser-Thr 3.6e-47 CL0016