Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1931 ATGAACACTACAAATCGGACGAACATTGATATCAACCCCTATAATCCATTCTCATTGGAACCCTCGTTCACAATTATTCCAAACCTGCGAGGAAAATTGATTCTGGGTATGGCTCTTTCTCTGAATACCCTTCTTATCATTCTGCTTCTGCCACCAATTTGTGTTTATGCCCAAACCAGAAGTAGCAATACAAGTGTGGGTGATTCTCTCACCGCAGGTGATGGGAACTCCTCGTGGGTTGTTTCCCCTTCTGGGGATTTTGCCTTTGGGTTTCAACCACTTAAAGATAGTCGTTTCTTGCTTTCCATCTGGTATGCCAAGATTCCAAACACAACCATCGTTTGGTATGCCAATGGAGACAAGCCTGCTCCGAAGGGGTCAAAAGTTCAGCTTACTGCTGCAGAAGGGCTTAAGCTCACTTCTCCTGATGGTGATACCCTATGGCAAATTCCAGATACCCTTTCTGGAACTGTTGCTCGTGGTACATTGAATAACTTTGGCAACTTTGTTCTTGAGGACAGGACTTCTAATTCTCTCTGGGAGACCTTCAAGAATCCTAAAGATACCATGTTGCCCTCACAGGTTTTGGAAAAGGAAGGAAAGCTTTCTTCTCGAAGTTCAGAGACGGATTTCGCCCTCGGAAGGTTCGAACTTCTTCTTAAGGACGATGGTAATCTTGTGATGCATTCTATAAACTTACCATCTATGTATGTTAATGAAAACTATTTTGAAAGTCGTACTGCTGGGTCCAATACATCAAGTCCTGGCAGTCAACTGGTCTTCAACAGATCCGGAGACATGTACGTTCTGAGAGAGAACAACGACACAGACAGACTCTCAAACGGGGCAACAGTCTCTCCCACTCAATATTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTTACTTTATATCGATATCCGAGAAGTTCGTCTAGCAATGAAACTTGGACCCCTCTGTGGTCTCAACCAGTTAATATCTGTACTAGTACCACTGTGAGTGAAGGAGTAGGCGTTTGTGGATATAATAGCATTTGTTATTTGGGTGATGATAATAGGCCAACTTGTCGATGTCCAAATGGGTATTCTCTACTTGATCCTAACAATCCATATGGGAGTTGTAAACCAGATTTCATACAAGGCTGTGAAGAAGATGAACTTAGTCAAGGGAAAGATCTATATGAATTTGAGGTGCTAACAAATGTTGATTGGCCTCTCTCTGATTATTTGCTTCAAAAGCCATATGGTGAAGATGACTGCAGACAGTCTTGTATGGACGATTGCTTTTGCGCTGTTGCCATTTTCAGAGAAGGTGACAGCTGCTGGAAGAAGAGGTGGCCACTTTCAAATGGCAGATATGACACGACTCTAAATAATGGTAAGGCTTTACTCAAGGTGAGGAAGGACAATTCTTCCCTAATTGGACCTCCTGGTCCTCCACTCATCCAGAAAAAGAATCAGGACACTTTGGTTGTGGTGGGCTCTGTGCTTTTGGGCAGCTCTTCGTTCCTTAATCTCTTACTAATTGGAGCAATCTGTCTGGGCTTTTCCTTCACTCATCACTTCCAGAAGAAGGTTAAAAATGTTGGCAGAAGTGACAGTGCTTTTGAAACCAACTTGCGCTGTTTTACTTTTAAGGAGCTTGAAGAGGCTACAAATGGGTTCAAGGAAGAGTTAGGAAGAGGAGCTTTTGGTGTTGTTTATAAAGGAACCTTACAAATGGGTTCTGCAATCCATGTGGCAGTCAAAAGGTTGAACACCTTTATTTTGCAAGAAACTGAGAAGGAATTCAAGAATGAAGTGAATGTCATTGGTCTGACCCATCACAAGAATTTGGTTCGTTTGCTTGGGTTCTCTGACGAGGGAGCAGAAAGGTTACTGGTATATGAGTACATGAGCAATGGCACATTGGCAAGCCTTCTTTTCAATGAGTCAAAACCCAGTTGGAGCTTAAGACTAAATATTGCATTTGGTATTGCGAGAGGACTTGTTTACTTACATGAAGATTGCAGCACTCAGATCATCCACTGTGACATAAAGCCTCAGAACATACTGCTTGACGACTACTTTAATGCTCGAATCTCAGACTTTGGATTGGCCAAGCTCTTGAACATGAATCAGAGTCGAACCCAAACAGCTATAAGGGGAACAAAAGGGTATGTTGCACTAGAATGGTTCAAGAATATGCCTATCACGGCCAAAGTAGATGTCTATAGCTTTGGTGTGTTGCTGCTTGAGATTGTTTGTTGCAGAAAAAGTGTGGATATGGAGCCAGAGAATGAAGACAAAGCAATCTTAACAGATTGGGCTAATGACTGCTACACAGAAGGTTCTTTGGAAGCTTTGGTTGAACATGATCAGGAAGCATTGGATGACAGGAAGAACTTGGAGAAGTTAGTAATGATTGCCATTTGGTGTGTTCAAGAGGACCCAACTCTTAGACCCACCATGAGAAAGGTTAGTCAGATGCTTGAAGGGGTTGCAGAAGTGCTTGATCCACCATGCCAGATTCCACATAGTGTGACTCAAGATCAGTATTACTCACTCAGTCAGCATGATTGA 2562 0.4251 MNTTNRTNIDINPYNPFSLEPSFTIIPNLRGKLILGMALSLNTLLIILLLPPICVYAQTRSSNTSVGDSLTAGDGNSSWVVSPSGDFAFGFQPLKDSRFLLSIWYAKIPNTTIVWYANGDKPAPKGSKVQLTAAEGLKLTSPDGDTLWQIPDTLSGTVARGTLNNFGNFVLEDRTSNSLWETFKNPKDTMLPSQVLEKEGKLSSRSSETDFALGRFELLLKDDGNLVMHSINLPSMYVNENYFESRTAGSNTSSPGSQLVFNRSGDMYVLRENNDTDRLSNGATVSPTQYYLRATLNFDGVFTLYRYPRSSSSNETWTPLWSQPVNICTSTTVSEGVGVCGYNSICYLGDDNRPTCRCPNGYSLLDPNNPYGSCKPDFIQGCEEDELSQGKDLYEFEVLTNVDWPLSDYLLQKPYGEDDCRQSCMDDCFCAVAIFREGDSCWKKRWPLSNGRYDTTLNNGKALLKVRKDNSSLIGPPGPPLIQKKNQDTLVVVGSVLLGSSSFLNLLLIGAICLGFSFTHHFQKKVKNVGRSDSAFETNLRCFTFKELEEATNGFKEELGRGAFGVVYKGTLQMGSAIHVAVKRLNTFILQETEKEFKNEVNVIGLTHHKNLVRLLGFSDEGAERLLVYEYMSNGTLASLLFNESKPSWSLRLNIAFGIARGLVYLHEDCSTQIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSRTQTAIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIVCCRKSVDMEPENEDKAILTDWANDCYTEGSLEALVEHDQEALDDRKNLEKLVMIAIWCVQEDPTLRPTMRKVSQMLEGVAEVLDPPCQIPHSVTQDQYYSLSQHD 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1931 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Dere03g1931 853 ProSitePatterns Protein kinases ATP-binding region signature. 559 583 IPR017441 GO:0005524
Dere03g1931 853 Gene3D Phosphorylase Kinase; domain 1 517 631 - -
Dere03g1931 853 SMART serkin_6 553 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1931 853 Pfam Protein tyrosine and serine/threonine kinase 555 824 IPR001245 GO:0004672|GO:0006468
Dere03g1931 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 58 184 - -
Dere03g1931 853 PIRSF SRK 33 853 IPR024171 GO:0004674
Dere03g1931 853 SUPERFAMILY Protein kinase-like (PK-like) 535 825 IPR011009 -
Dere03g1931 853 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 70 835 - -
Dere03g1931 853 FunFam S-receptor-like serine/threonine-protein kinase 522 631 - -
Dere03g1931 853 Gene3D Transferase(Phosphotransferase) domain 1 632 831 - -
Dere03g1931 853 ProSiteProfiles EGF-like domain profile. 324 368 IPR000742 -
Dere03g1931 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 632 832 - -
Dere03g1931 853 Pfam D-mannose binding lectin 112 198 IPR001480 -
Dere03g1931 853 FunFam Serine/threonine-protein kinase 187 331 - -
Dere03g1931 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 234 IPR036426 -
Dere03g1931 853 Gene3D - 56 184 IPR036426 -
Dere03g1931 853 ProSiteProfiles Bulb-type lectin domain profile. 61 184 IPR001480 -
Dere03g1931 853 CDD STKc_IRAK 559 826 - -
Dere03g1931 853 SMART blect_4 69 186 IPR001480 -
Dere03g1931 853 Gene3D - 185 317 IPR036426 -
Dere03g1931 853 ProSiteProfiles Protein kinase domain profile. 553 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1931 Dere-ChrDere03 31282351 31289040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1931 539 826 Receptor kinase-like Gene Family AT1G60800 45.918 1.45e-75 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere03g1931 Pkinase 5.8e-46 CL0016