Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1912 ATGCAGCTCAATCATCTCTGCGTCATTTTGCCTGCAGATTCTAGTGAATTTGAGCATCACCCACCGTCAAAAGTCAAACAACCTTCCCAGAAAGAAATCAAGATAAAAAAACCTGACAGGGCTTGTGGCGGTCAAGTTCTTGCTTTCCTTCGTGATTCTCTGAGCAAATTATATGGCACAAACTGTTTGAGCTTTTGCCGCAATGAAGTGGGAAAAAGGAAGCGACGCTCTGTTGTGTTGTTTCATGACATGGACGGTGTACAACTCTCTGCCAAGATTGGCAGGGACAACCCAAGAATCTTCAGCTTCGCCGAGCTTTTTATAGGGTCTAATGGTTTCAGTGAGGACCATGTTCTGGGAAGTGGAGGATTTGGCAGAGTGTACAAGGCTGTTTTGCCTAGTGATGGAACAGTGGTTGCTGTGAAATGTTGCTTGGAAGAGAAAGGGCAGCAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCCGTGGCCCATCTTCGCCACAGGAACCTTGTCAGGCTCAGGGGTTGGTGTGTTCATGAAGATCAGTTGTACCTTGTTTATGATTACATGCCTAACCTCAGCCTTGACCGGATACTCTTTCGCCGGCCTGAGAATTCAAATGTTGAGCCTCTTGGTTGGGGAAGGCGCAGGAAAATTGTTAAGGGTTTGGCTGCAGCATTGTACTATCTTCACGAGCAGTTAGAGACTCAGATCATTCACAGGGATGTCAAAACCAGCAACGTGATGCTTGATTCACAGTATAATGCTCGGTTGGGTGACTTCGGCTTGGCGAGGTGGCTAGAACATGAGCTCGAGTATCATCAAAGCAGGAAAACATCAACCAAAATTGACCCCTTCAGGTTGGCAGAGACAACAAGAATTGGTGGCACTATTGGGTATTTGCCTCCTGAGAGTTTCCAGAAAAGAAGCATTGCCACCGCAAAATCTGATGTGTTTAGTTTTGGAATAGTTGTGTTGGAAGTGGCATCTGGAAGGAGAGCTATTGACCTTGCATACCCAGATGATCAGATCATTTTGCTTGACCTCGTCAGAAGGCTATCTGACGAGGGAAAGCTACTACAAGCAGGTGATCCTCGGCTACGGGATGGTTCCTACAAGCTTTTTGAAATGGAGCACTTGCTTCGCATAGGCCTGCTTTGTACACTCCATGAGCCACAGTCAAGGCCTAGCATGAAATGGATTTTAGAAGCACTTTCTGACATTTCAAATCCATTGCCAGCTCTTCCTTCTTTCCATTCTCACCCTCTATATATCACTTTATCTTCTCCATCCGAAACTAGTTCTAGCAGCACAAATGCCTCTAGCTCTGTCACAGACAATGTCAGCACAATCACCAACTTTTCTTCAACCAACTATGTCACGGCAAATGGGAAAACAATATACATGACTGCTGAAGACAGAAACAGCGAAATTCCCTCCGTGAAGAGCATGAATCATCACACATCATTTCCTGTGGTTGAGGCTCCAAGAGAAATATCATACAAGGAGATTGTTTTGGCTACAGATCATTTTTCAGAGTCACGGAAGGTAGCAGAGCTAGACTTTGGAACTGCCTACCATGGCATCCTTGAGGATCATTACCATGTCATGGTGAAACGCCTAGGAATGAAGACATGCCCTGCATTGCGCGAAAGATTTTCTAATGAACTTCGAAATCTAGCAAGGCTTCGCCACCGGAATTTGGTGCAGCTTCGAGGATGGTGCACTGAGCAAGGAGAGATGCTTGTTGTGTATGATTACTCAGCAACAAGACTTCTGAGTCACCATCTTCTCCATCATAACAATCATAGAAATGGGTCTTCTGTCCTGCAATGGCATCAGCGATACAATATAATAAAATCTCTTGCTTCTGCCATTCTCTATCTTCATGAGGAATGGGAAGAACATGTAATTCATAGAAACATCACCTCTTCAGCTGTCATCCTTGAACCAGATATGAACCCGAGACTCAGCTGCTTTGCCCTGGCTGAATTTTTGACCCGAAACGAGCATGGCCATCATGTAATCAAAGACACCAGCAAATCAGTTCAAGGGATTTTTGGCTACATGTCACCAGAATATGTGGAATCCGGTGAAGCAACCTCTGCAGCTGATGTCTACAGTTTTGGTGTGGTGATGCTTGAAGTTGTCAGTGGACAGATGGCAGTGGACTTTCGGCAGCCTGAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGTGGTAAGAAAAAGACCACTCGAGGAATTAGCAGACATAAGGCTAAATGGAGAGTACAATTACAAAGAACTTATGAGAATAGTAAAGCTAGGAATTGCATGTACCCGCTCTAACCCAGAGTTGAGACCAAGCATGAGACAAATAGTATGCATCCTTGATGGAAATGACAATTTATTCATGGAAAGAAACCAGAAGGAAAGCAGGGAAGAATGGAAACAAAAGAATGCTTGTTCTTTGTCATTGATCAAGAGAATCCAAGCTCTAGGAATACAGTGA 2496 0.4447 MQLNHLCVILPADSSEFEHHPPSKVKQPSQKEIKIKKPDRACGGQVLAFLRDSLSKLYGTNCLSFCRNEVGKRKRRSVVLFHDMDGVQLSAKIGRDNPRIFSFAELFIGSNGFSEDHVLGSGGFGRVYKAVLPSDGTVVAVKCCLEEKGQQFEKTFAAELAAVAHLRHRNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPENSNVEPLGWGRRRKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYHQSRKTSTKIDPFRLAETTRIGGTIGYLPPESFQKRSIATAKSDVFSFGIVVLEVASGRRAIDLAYPDDQIILLDLVRRLSDEGKLLQAGDPRLRDGSYKLFEMEHLLRIGLLCTLHEPQSRPSMKWILEALSDISNPLPALPSFHSHPLYITLSSPSETSSSSTNASSSVTDNVSTITNFSSTNYVTANGKTIYMTAEDRNSEIPSVKSMNHHTSFPVVEAPREISYKEIVLATDHFSESRKVAELDFGTAYHGILEDHYHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHHLLHHNNHRNGSSVLQWHQRYNIIKSLASAILYLHEEWEEHVIHRNITSSAVILEPDMNPRLSCFALAEFLTRNEHGHHVIKDTSKSVQGIFGYMSPEYVESGEATSAADVYSFGVVMLEVVSGQMAVDFRQPEVLLVKKVHEFVVRKRPLEELADIRLNGEYNYKELMRIVKLGIACTRSNPELRPSMRQIVCILDGNDNLFMERNQKESREEWKQKNACSLSLIKRIQALGIQ 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1912 831 SUPERFAMILY Protein kinase-like (PK-like) 490 793 IPR011009 -
Dere03g1912 831 SMART serkin_6 113 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1912 831 SMART serkin_6 512 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1912 831 Gene3D Phosphorylase Kinase; domain 1 85 190 - -
Dere03g1912 831 Gene3D Phosphorylase Kinase; domain 1 472 588 - -
Dere03g1912 831 Pfam Protein kinase domain 114 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1912 831 PANTHER - 76 408 - -
Dere03g1912 831 FunFam Receptor like protein kinase S.2 191 412 - -
Dere03g1912 831 Pfam Protein tyrosine and serine/threonine kinase 516 790 IPR001245 GO:0004672|GO:0006468
Dere03g1912 831 Gene3D Transferase(Phosphotransferase) domain 1 593 818 - -
Dere03g1912 831 ProSiteProfiles Protein kinase domain profile. 512 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1912 831 FunFam Receptor like protein kinase S.2 87 190 - -
Dere03g1912 831 FunFam Receptor like protein kinase S.2 590 816 - -
Dere03g1912 831 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Dere03g1912 831 Gene3D Transferase(Phosphotransferase) domain 1 191 411 - -
Dere03g1912 831 SUPERFAMILY Protein kinase-like (PK-like) 97 439 IPR011009 -
Dere03g1912 831 ProSiteProfiles Protein kinase domain profile. 113 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1912 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Dere03g1912 831 FunFam Receptor like protein kinase S.2 472 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1912 Dere-ChrDere03 31061365 31063860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1912 502 795 Receptor kinase-like Gene Family AT3G53810 38.462 4.22e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere03g1912 PK_Tyr_Ser-Thr 3.5e-30 CL0016