Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1899 ATGAGAGCTATAAGGAATCTTTTGGGGTTCAATTGGAGTGGTTCTATTAATTCTACTTCTACCATTGGAAGCACTACTAGCAGACAATCTCTTTCTCTTGTTAGAAACATCATGTCTCAGTCAGATCAATCCCCTGCTTTTGACAAACCCAGATTGGTACTCAAGAAGGTGTTTGCCAGAAATTTGAATGAAAGAAGTCGTCTAATGGTTAATAGGAACATTGCAAGTGAGTTCAAGGGTTTGGATCCTTTCCTGAATTTGGATCACTTCTCAGTGACTTACCCTGGAGGATTCACTGATCATCCACACAGAGGCTTTGAAACAGTCACCTATATGCTAGAGGGAGCCCTAGTTCATCAAGATTTTGCTGGCTATAAAGGAACAATAAGAGCTGGTGATGTTCAATGGATGAGTGCAGGAAGAGGAATCATTCACTCTGAAATGCCTGCAGGAGTCGGTACACATACAGGAGTGCAGCTTTGGATCAATCTATCCAAGAAAGACAAAATGATTGAACCAAAGTATCAAGACCTTCTACAAGAGAGCATTCCAAAAGCAGAGAAGGATGGAGTTGAAGTCACGGTAATAGCAGGAGAAGCATTGGGGGTTCGTTCTGAGGTGTACACAAGAACTCCAGCCATGTTTCTTGATTTCAAGCTCAAACCACAAGCCCAGTTGCACCAAAGCATTCCAGAGTCTTGGAATGCCTTTGTGTATGTGCTTGAAGGAGAAGGAGTGGTTGGGTCCCCAACTTCATCACCAATTGGTCCGTACAATGTGGTGTTCTTGAGTTCTGGAGATGGTCTGAGTGTGTGGAACAAATCCTCTGAGCCACTGAGGTTTCTGGTGATAGCTGGGGAGCCGCTGAACGAGCAAGTGGCTCATTATGGTCCTTTTGTGATGAACTCACATGCTGAGATTGAACAGGCTATGGAAGACTTCCATTATTGCAAGAATGGTTTTGAGAATGGCAAGCATTGGAGGTCTCAGTAG 993 0.4381 MRAIRNLLGFNWSGSINSTSTIGSTTSRQSLSLVRNIMSQSDQSPAFDKPRLVLKKVFARNLNERSRLMVNRNIASEFKGLDPFLNLDHFSVTYPGGFTDHPHRGFETVTYMLEGALVHQDFAGYKGTIRAGDVQWMSAGRGIIHSEMPAGVGTHTGVQLWINLSKKDKMIEPKYQDLLQESIPKAEKDGVEVTVIAGEALGVRSEVYTRTPAMFLDFKLKPQAQLHQSIPESWNAFVYVLEGEGVVGSPTSSPIGPYNVVFLSSGDGLSVWNKSSEPLRFLVIAGEPLNEQVAHYGPFVMNSHAEIEQAMEDFHYCKNGFENGKHWRSQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1899 330 CDD cupin_pirin_C 212 288 - -
Dere03g1899 330 PIRSF Pirin 49 328 IPR012093 -
Dere03g1899 330 SUPERFAMILY RmlC-like cupins 76 328 IPR011051 -
Dere03g1899 330 Pfam Pirin C-terminal cupin domain 215 320 IPR008778 -
Dere03g1899 330 PANTHER PIRIN-RELATED 38 330 IPR012093 -
Dere03g1899 330 CDD cupin_pirin_N 77 164 - -
Dere03g1899 330 Pfam Pirin 75 162 IPR003829 -
Dere03g1899 330 Gene3D Jelly Rolls 70 315 IPR014710 -
Dere03g1899 330 Gene3D Jelly Rolls 184 289 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1899 Dere-ChrDere03 30832058 30834306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1899 50 325 Calmodulin-binding Proteins AT3G59220 57.348 2.26e-109 318