Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1896 ATGGTGAACCTCATGGAATGGCAGAAGCAGCAGCAGCAGCAGAATGGGAATGTTAACAGTGGAAACGGAGGAATGATGTATGTGAAGGTGATGACCGATGACCAATTGGAGACTCTCAGGCAGCAAATCGCCGTCTATACTACCATTTGCGAGCAACTCGTTGAGATGCATAAGACACTCACGGCTCAGCAGGATCTTGCAGGAGTTAGACTGGGAAACATTTACTGTGACCCATTGATGACTTCTGCTGGACACAAAATAACTTCCAGACAGAGGTGGACTCCAACCCCTGTGCAACTTCAAATTCTCGAGCGTATATTTGATCAGGGGAATGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACTGCCGAACTGAGCCAGCATGGCCAGATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCTCGATCGAAAAGAAAGCAGCAAAATGTGGCACCAAATAACACTGAATCAGAAGTTGAGACTGAAGCTGAGTCATCCAAGGATAAGAAGACAAAACCCGAGGAGCTTCAGTCCCAACATAGTGCATCTACCCGGGCAGAAGAATTGTGCTTCCAGAACCATGAAGTATGCTCTGACTTGCACTACTTGAATTCAGAGCCCGGTAAACCAGAATCCATGTTCCCATCAGATGGCAGTCTAAAAACTAGCAGAAGTTTCGGCCAAATGTCTGTCTTTGATGGAATGCTATCAAACTCAAGGGATGGCTATATCACTGGAAAAATGCAAGTGCCGGGAAGCTACAATTTATACCAGCAAGCAGGAGACTACAACATGACGGGTTGA 819 0.4567 MVNLMEWQKQQQQQNGNVNSGNGGMMYVKVMTDDQLETLRQQIAVYTTICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNTESEVETEAESSKDKKTKPEELQSQHSASTRAEELCFQNHEVCSDLHYLNSEPGKPESMFPSDGSLKTSRSFGQMSVFDGMLSNSRDGYITGKMQVPGSYNLYQQAGDYNMTG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1896 272 CDD homeodomain 90 152 IPR001356 GO:0003677
Dere03g1896 272 ProSiteProfiles 'Homeobox' domain profile. 86 151 IPR001356 GO:0003677
Dere03g1896 272 MobiDBLite consensus disorder prediction 148 190 - -
Dere03g1896 272 SUPERFAMILY Homeodomain-like 88 153 IPR009057 -
Dere03g1896 272 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 270 IPR044559 GO:0003700
Dere03g1896 272 Gene3D - 92 156 - -
Dere03g1896 272 Pfam Homeodomain 90 150 IPR001356 GO:0003677
Dere03g1896 272 SMART HOX_1 88 155 IPR001356 GO:0003677
Dere03g1896 272 MobiDBLite consensus disorder prediction 165 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1896 Dere-ChrDere03 30812855 30815493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1896 4 272 Wox Gene Family AT4G35550 51.007 1.58e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere03g1896 Homeodomain 1.3e-18 CL0123