LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere03g1883	ATGACGCAGGCTTTGGACACTACTTTGCTGCTGAAAGAAAAGGAAGAGGAACCGCTTATAACAAACCACCAGTTGGCGGCTGCGGATTCGGTGGTGGACGTTAGGGGCCCTGACTGTTTGGTGGGTCTAGAGTGCTTGCTGAACATTGTGAGGGCCCTGGGAATGGGATCATGCCTCGCTGTGGCCCATCCCCTCCCTTATTCGCCGGAATCCACTTCCGACAATGCGAAGCGAAGGAGGAGACCGAGGAGCAGCTCTTCTTTTGATTCTAGGATGGAATTGGGCCTACATAGAGTCCCTGGGAGAATGTTTGTCAATGGATCCAGCGAGGTTGCGTCCTTGTTTTGTAAACAAGGCAAAAAAGGGATCAACCAGGATGCCATGCTTGTTTGGGAGAACTTCTGTTCGAAGGATACCATTTTTTGTGGAGTTTTTGATGGTCATGGTCCTAATGGGCATAGGGTGGCAAAGAAAGTCAGGGATTCTTTTCCTTTAAAGCTTAGTGCTCAATGGGAATTGCATCATAATAATATAGATGGACTAAGTGATATCAGAAGTCCCAGGGGAAATCATAAGTCAGAGGAGATGGGGTTTAGAATGGTCGATGATAAACCTACTGCCAGTGATCATGAGCACAGCAGCACAAAAACCTTAAAGGCGCTGAAGGAATCTTTTCTGAAGGCTTGCAAGGTTATGGACAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTCACCTTGGTCAAGCAGGGGCAGGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCCATATTGGGTACCAGGGATGATGAAGATTCTCTTATTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGTAGAGAGAATAAAGCGCTGCAGAGGAAGGGTATTTGCTCTTCGTAACGAACCTGAGGTTGCTCGAGTTTGGCTGCCCAATGCTGACTCCCCAGGTCTTGCCATGGCACGGGCTTTTGGAGATTTTATCCTGAAGGACTTTGGCCTGATCTCTGTTCCTGATGTCTCACATCACCGCCTTACTGAGAAGGATGAATTTGTCGTATTAGCCACAGATGGGATTTGGGATGTTTTGTCGAACCAAGAAGTTGTAGAGATTGTGGCATCTGCTTCACGTTCTTCTGCAGCTCGTACACTAGTTGAGACAGCTGTTCGAGCATGGAGGACAAAGTACCCTACTTCCAAAGTTGATGATTGTGCCGTAGTTTGCCTCTTTTTTGGTTCAGACCTAGACTTGAAGTCAGCTTATTCCACAGACAAGGAGATACCAGAGGCATCAGTTAACCCCCAAGCTGACATTGGCAATAGGGGACCTGCTCCTGAAACCAGAGTTGACTGTTCAGGATTCTCTAGAGGGGAGAAAGGAGATGGAGTGAAAGCTGAACAGCAGCAGTAG	1449	0.4734	MTQALDTTLLLKEKEEEPLITNHQLAAADSVVDVRGPDCLVGLECLLNIVRALGMGSCLAVAHPLPYSPESTSDNAKRRRRPRSSSSFDSRMELGLHRVPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWENFCSKDTIFCGVFDGHGPNGHRVAKKVRDSFPLKLSAQWELHHNNIDGLSDIRSPRGNHKSEEMGFRMVDDKPTASDHEHSSTKTLKALKESFLKACKVMDKELKLHPDIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDDEDSLIAVQLTIDLKPNLPREVERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHRLTEKDEFVVLATDGIWDVLSNQEVVEIVASASRSSAARTLVETAVRAWRTKYPTSKVDDCAVVCLFFGSDLDLKSAYSTDKEIPEASVNPQADIGNRGPAPETRVDCSGFSRGEKGDGVKAEQQQ	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere03g1883	482	PANTHER	PROTEIN PHOSPHATASE	85	422	IPR015655	GO:0004722\|GO:0006470
	Dere03g1883	482	MobiDBLite	consensus disorder prediction	73	87	-	-
	Dere03g1883	482	ProSiteProfiles	PPM-type phosphatase domain profile.	111	424	IPR001932	-
	Dere03g1883	482	SMART	PP2C_4	105	422	IPR001932	-
	Dere03g1883	482	FunFam	probable protein phosphatase 2C 33	106	427	-	-
	Dere03g1883	482	MobiDBLite	consensus disorder prediction	465	482	-	-
	Dere03g1883	482	MobiDBLite	consensus disorder prediction	439	482	-	-
	Dere03g1883	482	MobiDBLite	consensus disorder prediction	68	92	-	-
	Dere03g1883	482	Pfam	Protein phosphatase 2C	212	408	IPR001932	-
	Dere03g1883	482	SUPERFAMILY	PP2C-like	111	425	IPR036457	-
	Dere03g1883	482	Gene3D	-	106	425	IPR036457	-
	Dere03g1883	482	CDD	PP2Cc	111	424	IPR001932	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere03g1883	Dere-ChrDere03	30663421	30666936	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere03g1883	55	426	PP2C-type Phosphatase Gene Family	AT3G02750	58.933	5.42e-156	452