Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1870 ATGTATATGATGTTGAAATCTATCAGAGAAAGCCTCATGAGCCTTCAATCTGTGTGTGTGAAGCAGAAGAATCAATCAGATAGTGAGTCAGTGAATGGTGTGCAGGGGGCAAATTGCCACGTTTGCATAGAGGAAAGCAACCAACATTGTGACTGTGACCATACCACTATTCAGGATGCTAAACCCAATAGTTCTTTTGCTCATGTTGTCATCAATATGGTTGGGATGCTCATAGGTTTGGGGCAATTATCAACTCCATATGCTGTAGAAAAGGGAGGGTGGGCCTTTGCATTAATATTCCTGATAGGGCTTGCAATAATGTGTGCTTACAGTTGCCACCTTCTTGGGAAATGCCTGCACAGGAACCCTAAGCTTAGAAGCTACGTAGACATTGGAGAGCATGCATTTGGAAGAAAAGGAAGAATGATAGCATCAACCTTCATCTACACAGAAATCTTCATGGCCCTTGTCTCCTACACCATCTCACTACACGACAACTTGTTCACAGTCTTCATGGGAACCCATTATCTGAGGAATCTGCAGTTGGGTAGTTTATTATCATCTTCTCAGATTCTGACTGTGCTGGCTGTGTTGATTGCTATGCCCAGCTTGTGGCTCAGAGACCTTTCCTCCATTTCTTTCCTTTCAACTGCTGGTGTTCTCATGTCTTTGATTATTTTCCTGTCTGTAGCTGTCACTGCCTTTTTTGGAGGTGTTAAGGTTAATCACTGCATTCCAGTTCTTCAGATACACAATGTTCCTTCTGTTTCTGGCCTCTACATCTACAGCTATGGTGGACACATAGTGTTCCCTGATCTCTATAAGTCCATGAAGGACCCCTCCAAGTTTACCAAGGTCGTTATACTGAGCTTCTCAATAGTGACAGTACTATATACAACACTGGGATTCATGGGTGCAAAGATGTTTGGGCCACAAGTAAACTCTCAGATCACTCTAAGCATGCCACAGAATTTCACAGTGACTAAAATTGCTGTGTGGGCAACGGTACTAACTCCAATGACCAAATATGCTCTTGAGTTTGCACCATTAGCTAGTCAGCTCCAGCGCAGGCTTCCCTCTTCAATGAGAAGCAGAACCAAGATGATAGCAAGAGGCACAGTGGGTTCTGTGCTGCTCTTAGTCATTCTAGCCCTTGCTCTTTCTGTGCCTTATTTTGAGTATGTACTTAGTCTCACTGGTTCACTAGTCAGTGTTTTCATATGCTTGATCTTCCCTTGTTCTTTCTACACCAAGATCTTTTGGGGTCAAATTCCAAAGCCTCTCTTAGTGTTGAACTTTTCTCTCATCACTTTTGGGCTTATCATTGGGGTTATGGGCACCATTTCTTCCTCCAGGTCACTGTTCAATAATCTTCAAGCAGCTCACTGA 1389 0.4327 MYMMLKSIRESLMSLQSVCVKQKNQSDSESVNGVQGANCHVCIEESNQHCDCDHTTIQDAKPNSSFAHVVINMVGMLIGLGQLSTPYAVEKGGWAFALIFLIGLAIMCAYSCHLLGKCLHRNPKLRSYVDIGEHAFGRKGRMIASTFIYTEIFMALVSYTISLHDNLFTVFMGTHYLRNLQLGSLLSSSQILTVLAVLIAMPSLWLRDLSSISFLSTAGVLMSLIIFLSVAVTAFFGGVKVNHCIPVLQIHNVPSVSGLYIYSYGGHIVFPDLYKSMKDPSKFTKVVILSFSIVTVLYTTLGFMGAKMFGPQVNSQITLSMPQNFTVTKIAVWATVLTPMTKYALEFAPLASQLQRRLPSSMRSRTKMIARGTVGSVLLLVILALALSVPYFEYVLSLTGSLVSVFICLIFPCSFYTKIFWGQIPKPLLVLNFSLITFGLIIGVMGTISSSRSLFNNLQAAH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1870 462 PANTHER AMINO ACID TRANSPORTER 58 447 - -
Dere03g1870 462 Pfam Transmembrane amino acid transporter protein 63 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1870 Dere-ChrDere03 30544245 30546948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1870 39 462 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.080 1.40e-168 479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1870 03 30544245 30546948 Dere03g1870 03 30544245 30546948 ECH