Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1857 ATGAATAGTGTCTTCAAGAAGAACAGGAAGACGAGATGGCATGTGAATGCTGGCCATGGCTGTATCGACAAGCACCGGAAGCACCTAGGAGGTCGAGGTAATGCTAGAGGAATGGCTGGTGGGCGAGGAGGAATGGACGCTGTGGTGAAAGTTTTCTGTGTGCATACTGAGCTGCATTTCTTGCTGCCGTGGCAAAGAAAAAGGCAATATAGTTCCAGTAGTGGTGGTTTCATAATGGCGGGTAAGAGAGTGTTAACTAATGCGTATTTCGTGGAGCATCATACCCAGGACAAGCTCAAAAAACGTGGTCTGGACACTAAATACTTAGCTACAGTACTAGTCATTGGAATCGAGTGTGATATTGCAATATTGATGATGAATGATGATGAATTATGGGATAGAGTTTCACCTGTGGTGTTTGGAAATTTACCTACATTGCAAGATGTTGTGACAGTGTTCTTGGGGTTGAGTGGCAGGAGATGGAAAATCCTGATCTGCGAATTTGAGGGGGATGCTAAGGCCTTTATTCAGGATTATATAAGAATGCTAGAGGAAGGTGGTGAAGGGGAGTCCTTTGTATGCATTAGAAGACTTAGATATCTCTTTCAGATATATATGAAATCACATCGTCTTGCTGATGTTGAGATGGTCCAAAGAAAGATTCTGCATAAAATGGAACTATTAAAGGGATGGAATTCGTTGGACACTGTTGCTATGGCTGAAAGTTTGGCTCTGACTCTGCAAGCATATAATAATTTAAACGATTCAAAAGAGCTTCTTGAAAGATGTCTTAATGCCTGGAAAGCCTTACTTCCTGGTGACCACATTCAGATTGGCGCAAACCTGCTTCATCTAACAAGGGGTGTGGTGCTTAACAGCAGCCAACTACAAAAATGGGATGTTATAGGAAAGCTGAGTTTGATAAGGCAAAGGATCATTTGA 942 0.4236 MNSVFKKNRKTRWHVNAGHGCIDKHRKHLGGRGNARGMAGGRGGMDAVVKVFCVHTELHFLLPWQRKRQYSSSSGGFIMAGKRVLTNAYFVEHHTQDKLKKRGLDTKYLATVLVIGIECDIAILMMNDDELWDRVSPVVFGNLPTLQDVVTVFLGLSGRRWKILICEFEGDAKAFIQDYIRMLEEGGEGESFVCIRRLRYLFQIYMKSHRLADVEMVQRKILHKMELLKGWNSLDTVAMAESLALTLQAYNNLNDSKELLERCLNAWKALLPGDHIQIGANLLHLTRGVVLNSSQLQKWDVIGKLSLIRQRII 313
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1857 313 Gene3D Tetratricopeptide repeat domain 179 297 IPR011990 GO:0005515
Dere03g1857 313 Gene3D - 45 131 IPR043504 -
Dere03g1857 313 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 170 300 - -
Dere03g1857 313 SUPERFAMILY Trypsin-like serine proteases 46 149 IPR009003 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere03g1857 Dere-ChrDere03 30405278 30406973 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1857 1 38 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 73.684 4.32e-11 58.5