Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1849 ATGAATGCCAATGAGACATTATTTATGGCACTTAGGATGTTGAATGCATCCAATAATGATGAGACCTATCAAGTTTGCATTCATGCTCCACCCAATACTGTTTCAGATGGCCTCTGGGGTGGCCAACACAATGGTAGGACCCCAATGAGGTCTTCTTTACCAGTTTTTGAATTGCAGATTCTTGTCATTTTTTGTCTCACTCAAATCTGCCATTTCTTCTTCAACCACTTGGGATTGCCTCTCTTCTTTTCCCAGATGATGGTTGGGCTGATTCTAGGGCCTTCACTTCAGATAGAGTCATTGAACTTGAATCATTACAAGAAGATGTTGTTTCCATTCGGAAGTCAAGACATACTTGTAGGAGTAACATCAATAGGATATGTATTCTTTATGTTTCTGACATCTGTACAGATGGATCTCAGCATGATAACTAGAACAGGGAAGAGGGTTTGGAGCATTGCCTTAATAGGATTGATAGCACCTATAGTGGTTGGCGTTTCAAGCGTGTCCTCGTCCGCTGAAAACTTAAAGAAGGTTATGGGACCAAATTTCCAGGACCTTTATGTTGTGGTGATATCACACAGTATAACTTCATTTTCTGTCGTTGCTTGCCTCCTCAATGACCTTAAACTAGTCAACTCTGAACTGGGAAGGCTGGCATTATCCACAGCCTTAGTGAGTGACACAGTGAGCTTAGCTATTGCCAGTGTTGGAACTGCATTAGGAGCAGGAGAAAAGGTTGACAATAAACTGGATTTGGCTGGCTTGGCATCATTTTTGGCCTTTGTTATCCTCATTCCATTACTATCCAGACCAGCTATGTTCTGGATCATTAGGCATACTCCAGAAGGAAGACCTGTGAAGGATCATTACATCTATGTCATCATTGCAATGGCCTTGGGTTTTGGTTGGGTTTCAGTACAGTTGCACCAGGAATTCATCTTAGGACCTTTCATCTTCGGATTGTCTGTCCCAGAAGGTCCTCCACTTGGCTCAGCCTTAATTAGGAAGCTTCAACTCTTTGGCATGTGGTTCCTTTTGCCAATCTTTGTGACCACTTGTGTGATGAAGGTTGATCTTTCATTGGAGTATGCACCAACAGTAGTTTTAACCATTATTGCCTTCATCCTTCTGACTCATCTGGTCAAAATATTAGCCGCTTTGGTACTTTCATTATGTTGCAAGATGCCCTTAAGTGATAGTTTGGCTATTGCCCTCATTTTGAGCTGTCAAGGAGTAGTGGAAATATGCATGTACAGTGGTATATATGATCAAAAGAACATGAGTGGCCAAACTTATGGAATCTTGATGATCGCTGTAATGATCATGTCAAGCATGGTGCAGATGTCGCTGAAATACTTGTATGATCCTTCAAAAAAATACACTTGCTATCAGCAAAGGAACATTATGAATCTGAAATTCAACTCTGAGCTGAGGATGGTTGCTTGCATTCATAAGCAATCCCACATATCTCATATCATTGATTTTCTTGATATCTGTTATCCAACAGAAGACAATCCTATGACTCTGGAGGTATTGCATCTGATTGAACTAGTTGGGAGGGCCTTACCCATTTTTGTCTCACATAGTCATCAGAAGACAATCTCAGGTTCACTCAAATCCTACTCAGACAATGTCATTCTATCTTTTGATCTTTATGAACATGATAACCCTGCTGCATCAGTACACACGTACACAGCAATTTCTCCACTTAGCCTCATGCATGAAGATGTTTGTAACCTGGCCCTGGACAAACTTGCATACATAATAATTCTTCCATTCCATCAAAGATGGTCTGCTGGTGGTATAATTGAGTCTGATGACAAGAACATAAGGTCAACAAACTTGAAGCTCCTGGAAAGAGCTCCATGCTCGGTTGGAATCCTCGTGAGTCGCGCTTCCCTTTTAAAGGATTCATTATTAAGGTTAGCTGTAGTGTTTCTGGGTGGGGAGGATGACAGAGAGGCTTTGTGCTTAGCCAAAAGAGCAACTAGGGATCCTAGGGCTTACCTAGTTGTGTATCACCTGATTGGTGAGGACAATGGAGGAACATCTAGCTTGGAAAACATCCTTGATAAAGCAGTGCTGAAAGAAATAAGGCAAGATTATTCAGGTCTGAGTAATGTAACTTATAGAGAGATTTCTGCAAAGGATGGAACCCAGACAACATCTTTTCTTCGTACTATAGTAAATGGGCATGACTTTTTTATAGTTGGGAGAAGACATGGAATCAACGCATCTCAAACATCTGGGCTTACACATTGGAGTGAGTTTCCAGAATTAGGTACCATTGGTGATTTGCTTGCTTCACCAGATTACAGGAGCAGAGCTTCTATCTTGGTGGTGCAACAACAAGTCTCTGACACTCAAACCAAGTTCGTTCCGGTTCGGTGGTTCTGCCCTCCCGCCGCCGTGGTTCATTGGTTTACTGGTTCACTGGTTCCGGTCAACTTCCGTGGTTCACAGGTGCGTCCTACTCCGCCTACGCCGTGGTTCACTGGTTCGTTCACGCCGTCCTGCACTCCTGCTCTTGATCGTGACATTCTCGCCGTCCTTCCGTTCAAACTCTGTTCTGGGTGCCTCTTCCGGTCAGAAAACCCTAGAAGGAATATGCATTGTTACCTCTCTTTCGTTCGCCATGCTAGTAGATGCTCTGCTGCTTCATCTCTGCTTTCTCAATCTCTGGCCAGACGTTCGGTTCAAAGCTATGGCAGTTTAGAGGTTCTGAGATCTCATGGATCCCCCGGATCTCTGTGCTTGTCCAAGTGCTTCTCGGGGTTACCACAAAATAAAGGTGATAGTCTGATAGGGGTTTTTCAATCTTTTGAAACTGCAGGACATGTTAGAAGGTTCTCAAGTATGTATTCGGGGTGGAACAATGTGAATGAAAATGTTAATGCTTCCCATGGTTTTAATCTGGACTCTCAAAGAAATTCAAACCCCCTCAGCCAGAATGATGGTGAGACTAAGAAGAGCTCCACGCCTATGGACTTTGTGAGAGGAATTATAGAGACAGATGGAAGGGATGTTATGGGGGCTGCTCAACTCTCCCGGTATAATTTAGAGCATGATGCTGATTTTGTTCATATAAAGCTGTTGCGTAACAATACCTTTGTTACTGTCACGGATTCTAAAGGAAATATAAAACTTAATGCCTCAGCTGGATGTTTGAAAGAACTGAAAGGCGGGCAAAAACTTTCCCAGTATGCTGCTGAAGCTACAGCAGAAGAAGTTGGAAGAAGGGCTAGGAGGTTGGGGTTGAAATCTGTTGTCATGAAAGTGAAAGGATTTACATATTTTAAGAAAAAGAGGCAAGCAATTGTAAGCTGGAGAGAGGGCTTTACTAATTCTCGACTGGATAGAAATCCAATTGTATACATTGAAGATTCCACTCGACGTCCCCATAATGGCTGTCGGCTTCCAAAGAGAAGACGTATTTGA 3441 0.4272 MNANETLFMALRMLNASNNDETYQVCIHAPPNTVSDGLWGGQHNGRTPMRSSLPVFELQILVIFCLTQICHFFFNHLGLPLFFSQMMVGLILGPSLQIESLNLNHYKKMLFPFGSQDILVGVTSIGYVFFMFLTSVQMDLSMITRTGKRVWSIALIGLIAPIVVGVSSVSSSAENLKKVMGPNFQDLYVVVISHSITSFSVVACLLNDLKLVNSELGRLALSTALVSDTVSLAIASVGTALGAGEKVDNKLDLAGLASFLAFVILIPLLSRPAMFWIIRHTPEGRPVKDHYIYVIIAMALGFGWVSVQLHQEFILGPFIFGLSVPEGPPLGSALIRKLQLFGMWFLLPIFVTTCVMKVDLSLEYAPTVVLTIIAFILLTHLVKILAALVLSLCCKMPLSDSLAIALILSCQGVVEICMYSGIYDQKNMSGQTYGILMIAVMIMSSMVQMSLKYLYDPSKKYTCYQQRNIMNLKFNSELRMVACIHKQSHISHIIDFLDICYPTEDNPMTLEVLHLIELVGRALPIFVSHSHQKTISGSLKSYSDNVILSFDLYEHDNPAASVHTYTAISPLSLMHEDVCNLALDKLAYIIILPFHQRWSAGGIIESDDKNIRSTNLKLLERAPCSVGILVSRASLLKDSLLRLAVVFLGGEDDREALCLAKRATRDPRAYLVVYHLIGEDNGGTSSLENILDKAVLKEIRQDYSGLSNVTYREISAKDGTQTTSFLRTIVNGHDFFIVGRRHGINASQTSGLTHWSEFPELGTIGDLLASPDYRSRASILVVQQQVSDTQTKFVPVRWFCPPAAVVHWFTGSLVPVNFRGSQVRPTPPTPWFTGSFTPSCTPALDRDILAVLPFKLCSGCLFRSENPRRNMHCYLSFVRHASRCSAASSLLSQSLARRSVQSYGSLEVLRSHGSPGSLCLSKCFSGLPQNKGDSLIGVFQSFETAGHVRRFSSMYSGWNNVNENVNASHGFNLDSQRNSNPLSQNDGETKKSSTPMDFVRGIIETDGRDVMGAAQLSRYNLEHDADFVHIKLLRNNTFVTVTDSKGNIKLNASAGCLKELKGGQKLSQYAAEATAEEVGRRARRLGLKSVVMKVKGFTYFKKKRQAIVSWREGFTNSRLDRNPIVYIEDSTRRPHNGCRLPKRRRI 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1849 1146 MobiDBLite consensus disorder prediction 969 992 - -
Dere03g1849 1146 PANTHER CATION/H + ANTIPORTER 34 786 - -
Dere03g1849 1146 Pfam Ribosomal protein S11 1028 1145 IPR001971 GO:0003735|GO:0005840|GO:0006412
Dere03g1849 1146 SUPERFAMILY Translational machinery components 1025 1146 - -
Dere03g1849 1146 Gene3D - 56 463 IPR038770 -
Dere03g1849 1146 FunFam Probable ribosomal protein S11, mitochondrial 1017 1146 - -
Dere03g1849 1146 Hamap 30S ribosomal protein S11 [rpsK]. 990 1146 IPR001971 GO:0003735|GO:0005840|GO:0006412
Dere03g1849 1146 Gene3D Ribosomal protein S11 1015 1145 IPR036967 GO:0003735|GO:0005840|GO:0006412
Dere03g1849 1146 MobiDBLite consensus disorder prediction 969 994 - -
Dere03g1849 1146 Pfam Sodium/hydrogen exchanger family 62 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1849 Dere-ChrDere03 30304215 30311754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1849 21 785 Antiporter Super Family AT5G22900 35.273 5.29e-148 463