Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1772 ATGGAGTTCCCTAGCAAATTTCCCTCTACAAATGAACCAAGACTTCTTGAATGCAAATTTACAAAGACATTGAGTTATTCACCAGTTACAACAAATGGACATCATTCACTGAGTAGTGGAGAACTCAGGTATTTTGAGAATTATGATTCTTCATCTGTTCCAGAGAGATTGATGGACCTTACTGAACAGTCAACTGAAGGATCAGAAACTATATTGAGTACTAACATTGTGACAGAGAAGTTCATCCCTACACCTGAAGCAATTAAATTGGACAATGAAACACTGGGCAGCACAGAGGCAAGTATTGGTGACCTTTTTTCTGGAATCAATGAATCATTTAATGCCTCAATTAGTAAGGGAGAAAATGCTCTACAAAGCTCATTTGATACTGCCACTTCTTTGGTGGGATCTGTCATTGAAAATGCTACTAAGTCTGTAGACAATGCTTTTAGTGAAGCCTTTTCTGCTGTTGATCAAACAGGAGAATTAGCCAATAAGAAATTGACAAGCTTTTCAAGTGATCTAAGCAGAACCACAAGCAAAGCACCTGCTATTGCTATTGATGTGTTGCGACGTACAATCATAGCAGTAGGGAGTTCTTTAACTAGTGGGGCCTCCTATGTTGTCTACCTTTATGGGTCAGCCAAGGAGCTTCTTCCTGCAGGGATTAGGGACACAGTAAATGCATATGAAGCTAAAGCAACTGAAATATTGAGGCCTATTGGGTCTGCATCTCAAGAGATATACATGACTGTCCATTCATTGGAGAAGAGTCTTGGCTTAGATCCAAATGATCCGATTGTTCCATTTGTTGTATTTGTAGGCTCTTCAGCAACATTATGGGCTGTATATCGGTGGTGGGCATATGGGGGTTACTCAGGAGATTTATCTCCTAAATCAGCTTTGAATCTCTTGTCTGAGAATGCGAATGCCGCACTTATAGATATCCGACATGAGGATCTGAGAGAAAAAGATGGTATTCCTAATCTTCGATGGGCTGCACGGTTTCGCTATGCAAGTGTAACTCCGCTAGAGGTTGATAGTTCCATTAGAAATTTGATCAAGAGTGATAGAGACCTTCATGACTCCTTGATTGCTGTTATTATTCGAAATTTGAAGATTGTAAAGGACAGTTCCAAGGTTATAGTCATGGATGCTGATGGTAGTCGTTCCAAAGGCATTGCAAGATCTTTGAGGAAAATTGGGGTCAAGAATCCATACTTGGTTCAAGGTGGTTTTCAGTCTTGGATGAAGCAAGGTCTCCGCATTAAGGAACTCAAACCAGAGACAACACTTACTATACTCAATGAGGAAGCTGAAGCAATTCTAGAGTATCTTAGCCCATCTCCTCTGCAAATTTTAGGATATGGTGTGGCTCTTTTTACGGGCTTGTATGCATTATTAGAGTGGGAGAAGACACTACAGTTAATTGGTGTTTTTGGCCTCAGTTTGACAATCTATCAGAGGGTGAGTTCATATGAGGATTCTGAAGATTTTAAGCAAGATGTGAGGCTGTTGCTTACTCCTGTTAGACTAGGAGCTCAAGCAGTTTCATGGGCTGCTGGAAAAGTAGAAACAAACCGCATAGGGTTGCCTACTTCACCTTCATCATTAGATGTTCAGAACCGAGTTTTGCAGGCTGCCGCGAAGCATGAATCTCAGCCATCCGATGCTGAAAGTATCCAAGATCCAATGGCTCCTGAAGCATCAATTCCTCTCAATGAAAATGCATGA 1734 0.41 MEFPSKFPSTNEPRLLECKFTKTLSYSPVTTNGHHSLSSGELRYFENYDSSSVPERLMDLTEQSTEGSETILSTNIVTEKFIPTPEAIKLDNETLGSTEASIGDLFSGINESFNASISKGENALQSSFDTATSLVGSVIENATKSVDNAFSEAFSAVDQTGELANKKLTSFSSDLSRTTSKAPAIAIDVLRRTIIAVGSSLTSGASYVVYLYGSAKELLPAGIRDTVNAYEAKATEILRPIGSASQEIYMTVHSLEKSLGLDPNDPIVPFVVFVGSSATLWAVYRWWAYGGYSGDLSPKSALNLLSENANAALIDIRHEDLREKDGIPNLRWAARFRYASVTPLEVDSSIRNLIKSDRDLHDSLIAVIIRNLKIVKDSSKVIVMDADGSRSKGIARSLRKIGVKNPYLVQGGFQSWMKQGLRIKELKPETTLTILNEEAEAILEYLSPSPLQILGYGVALFTGLYALLEWEKTLQLIGVFGLSLTIYQRVSSYEDSEDFKQDVRLLLTPVRLGAQAVSWAAGKVETNRIGLPTSPSSLDVQNRVLQAAAKHESQPSDAESIQDPMAPEASIPLNENA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1772 577 MobiDBLite consensus disorder prediction 549 577 - -
Dere03g1772 577 Pfam Rhodanese-like domain 298 418 IPR001763 -
Dere03g1772 577 ProSiteProfiles Rhodanese domain profile. 307 425 IPR001763 -
Dere03g1772 577 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 38 568 IPR044690 GO:0009704|GO:0071277|GO:0090333
Dere03g1772 577 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 281 424 IPR036873 -
Dere03g1772 577 SMART rhod_4 297 422 IPR001763 -
Dere03g1772 577 CDD RHOD 302 416 - -
Dere03g1772 577 Gene3D - 292 432 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1772 232 386 Sulfurtransferasese or Rhodanese AT5G23060 27.607 3.12e-11 62.8