Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1771 ATGTTCAAGAGGACGTCTGAATCATGGGAAAAAAAGAAAAGAAGATTGGGACATTCATACGGAGAGATGCGTTGCTATGGATTGACTATCCCAGGAAGCGATTATCGCTTCTTCTCCTCAAAACCCATTTCTCTATCCGGCAACAACAGTTACAACCACAAATCCCTCAATTTCCCTTTTCGAACCGGCGGTTTCGGTTCTCTCAGAGTTAAAGCTGCCATTAACGATGGCTACGTGGCCGAGGCTTCCAAGCTGAGCTTCTATGAGCTTCTGGGTATACCCGAATCTGGGTCCTTGCTCGAGATCAAGCAGGCTTACAAGCAGCTCGCGCGAAAGTATCACCCGGATGTGTCGCCGGCGGATCGGGTCGAGGAGTATACAAGGAGGTTTATTCAGGTGCAGGAGGCCTATGAGACCTTGTCTGATCCCAGAAGGAGAGCCATGTATGACAAAGACATGGCCAGGGGGATTCACTTGGCTTTCTCCGCTCGCCGACAGTACTACGACGATGAGGTAATTGAACAAAAAAGTGAATGGAAAGCTCGCTGGCAATCTCAGCTATCAGAGCTGAAGAGAAGAAGCGAGTTCAGAGATGGTGGAGAAAATATGTCATGGGGAGCTAGAATGCGACGACGAAGGGAAGAATCATCAAATGAACTATGA 663 0.4842 MFKRTSESWEKKKRRLGHSYGEMRCYGLTIPGSDYRFFSSKPISLSGNNSYNHKSLNFPFRTGGFGSLRVKAAINDGYVAEASKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPADRVEEYTRRFIQVQEAYETLSDPRRRAMYDKDMARGIHLAFSARRQYYDDEVIEQKSEWKARWQSQLSELKRRSEFRDGGENMSWGARMRRRREESSNEL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1771 220 ProSiteProfiles dnaJ domain profile. 86 153 IPR001623 -
Dere03g1771 220 FunFam Chaperone protein dnaJ 20, chloroplastic 72 181 - -
Dere03g1771 220 Pfam DnaJ domain 87 150 IPR001623 -
Dere03g1771 220 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Dere03g1771 220 Gene3D DnaJ domain 75 191 IPR036869 -
Dere03g1771 220 PRINTS DnaJ domain signature 145 164 IPR001623 -
Dere03g1771 220 PRINTS DnaJ domain signature 125 145 IPR001623 -
Dere03g1771 220 PRINTS DnaJ domain signature 88 106 IPR001623 -
Dere03g1771 220 PRINTS DnaJ domain signature 106 121 IPR001623 -
Dere03g1771 220 SUPERFAMILY Chaperone J-domain 83 158 IPR036869 -
Dere03g1771 220 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 81 217 - -
Dere03g1771 220 SMART dnaj_3 85 145 IPR001623 -
Dere03g1771 220 CDD DnaJ 87 142 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1771 Dere-ChrDere03 28806140 28808316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1771 82 150 C2H2 Transcription Factor Family AT1G74250 43.056 2.44e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1771 03 28806140 28808316 Dere03g1771 03 28806140 28808316 ECH