Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1744 ATGAATGGCTATTTCCAACTCACTCTCACATTCACACAAGCTCATTCGTATCTGCGTTCTTCCCGGTTTTTGTCGTGTTTTATAGGATTCCCTTCTTGTGCTCTCTCCGGTATGGGCTTGACGGATCTATCATTCTCCTGCACCTTCCTGCTTCTTCTGTTGGCTAACTTCGTATCCTCCGATTTGGCCAAAGACAGAGAAGAGTGCGCCGACAAGCTCGTCGGACTCGCTCCCTGCCTTCCCTATGTCGGCGGCCAAGCCAAGACTCCGACCATCGATTGCTGTACTGGTCTCAAACAGGTGCTGGACCAGAGCAAGAAATGCATCTGCATCCTCATCAAGGACCGCAACGACCCCAACCTCGGCATCACCATCAACGCCACCCTCGCCGTCCAACTTCCCTCTGCCTGCCACGTCCCCGCTAACATCTCCGAATGCGTAGATCTTTTGCACTTGAAACCTAATTCTACAGAGGCCAAGGTGTTCGAGGGATTTGATAAGGCCACTCAGACTAACAGCACCAGTTCCAGTTCCACTCCAGTCGCTCCTAGTGCGAACAACACTGGAAAGGGATCCAGTCCAAGCACAAGTGGTAATGCGAAGAGTGAAGGAGTATCTGTGAGGGGAAAGAGGTGGTTGGTAGGTGAGCTGGTTTGTGTGATTTTACTATTTGTTTTCAACTTGTTAGTTTGA 693 0.5051 MNGYFQLTLTFTQAHSYLRSSRFLSCFIGFPSCALSGMGLTDLSFSCTFLLLLLANFVSSDLAKDREECADKLVGLAPCLPYVGGQAKTPTIDCCTGLKQVLDQSKKCICILIKDRNDPNLGITINATLAVQLPSACHVPANISECVDLLHLKPNSTEAKVFEGFDKATQTNSTSSSSTPVAPSANNTGKGSSPSTSGNAKSEGVSVRGKRWLVGELVCVILLFVFNLLV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1744 230 PRINTS Plant phospholipid transfer protein signature 68 84 IPR000528 GO:0006869|GO:0008289
Dere03g1744 230 PRINTS Plant phospholipid transfer protein signature 89 103 IPR000528 GO:0006869|GO:0008289
Dere03g1744 230 PRINTS Plant phospholipid transfer protein signature 124 141 IPR000528 GO:0006869|GO:0008289
Dere03g1744 230 Pfam Probable lipid transfer 62 146 IPR016140 -
Dere03g1744 230 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 57 189 IPR043325 -
Dere03g1744 230 CDD AAI_LTSS 76 139 - -
Dere03g1744 230 SMART aai_6 69 146 IPR016140 -
Dere03g1744 230 MobiDBLite consensus disorder prediction 169 203 - -
Dere03g1744 230 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 66 146 - -
Dere03g1744 230 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 68 147 IPR036312 -
Dere03g1744 230 Gene3D - 66 146 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1744 Dere-ChrDere03 28467043 28468469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1744 49 229 Acyl Lipid Metabolism Gene Families AT2G44290 42.188 2.91e-50 161