Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1729 ATGCTTTGCCCAGACAGCACGACTAAGAGAGCTAGCATGGGAGAGATACAAATCAGAGAGAAAGAAATGAGGGAGAAGGAAGAAGAAGAAGCAGAAGCAGAAATGGACATTTACAAATACATATTCGGGTTCGTTGAAATAGCAGTCATAAAATGCGCCATCGACCTCAACATAGCAGACGCCATGGAAAGCCACAAGAGCCCCATGACGCTTTCGCAGTTATCGTCAACCCTAAACTGCAACCCTTCCATGCTGTACCGCATCATGCGGTTCCTGGCCCACCGAAACATCTTCAAACAGATCACCACCGTCCATGGCTGTCCAGCCTACACCCACACCGCTCTTTCTCGCCTTCTGATAAAGAACAGCGAACGAAGCAGAGCTGCTCTCGTTGCGCTCGTGACTAGCCCGGTGATGCTGGCCCCGTGTCAGAGTCTGAGTGCTCGGGTTTTAGTGAACGGAACGTCATGGTTCGAGAAGGCTCACGGCGAGGACGTGTGGAATTATGCGGCAGCGAATGCGGAGCACAGTGAGCTGATCAATGAGGCGATGGCGTGCGATGCTCGGAGGTCGATGAGGGAGATGGTGGAACAGTGTGGGGAGGCGTTCGAGGGTGTGAGCAGTGTGGTGGATGTGGGTGGTGGGAATGGCACTGCCATGAAAGTATTGGCTAGGGCTTCTCCTCACTTGAGATGCATCAACTTTGATCTTCCACATGTTGTCTCTGCTGCACCGAAGTGGGATGGCGTAGAACATGTCGCAGGTGACATGTTTGTCAGTGTTCCAAAAGCTGATGCTGCCTTTCTCATGTGGGTATTACATGATTGGGGAGATGAAGAATGCATCCAGATCTTAAAGAAATGTAAGGAAGCTATTCCACATGAAAAGGGGAGGGTGATAATAGCGGAGGCAGTGATAGAAGAAGGATCGAAGGAAGACAAGTTGAAGGCCGTGGGGTTGATGACGGACATCATGATGATGGCTTACACTAATGCAGGTAAGGAGAGGACTCTCAAAGAATGGGAGTACGTTATCAATGAGGCTGGATTCAGCAGATTCACTGTCAAGAACATCCAGTCAGTGAAGTCTGTGATTATGGCTTTCCCATGA 1110 0.5009 MLCPDSTTKRASMGEIQIREKEMREKEEEEAEAEMDIYKYIFGFVEIAVIKCAIDLNIADAMESHKSPMTLSQLSSTLNCNPSMLYRIMRFLAHRNIFKQITTVHGCPAYTHTALSRLLIKNSERSRAALVALVTSPVMLAPCQSLSARVLVNGTSWFEKAHGEDVWNYAAANAEHSELINEAMACDARRSMREMVEQCGEAFEGVSSVVDVGGGNGTAMKVLARASPHLRCINFDLPHVVSAAPKWDGVEHVAGDMFVSVPKADAAFLMWVLHDWGDEECIQILKKCKEAIPHEKGRVIIAEAVIEEGSKEDKLKAVGLMTDIMMMAYTNAGKERTLKEWEYVINEAGFSRFTVKNIQSVKSVIMAFP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1729 369 Pfam O-methyltransferase domain 147 351 IPR001077 GO:0008171
Dere03g1729 369 SUPERFAMILY "Winged helix" DNA-binding domain 27 123 IPR036390 -
Dere03g1729 369 Gene3D Vaccinia Virus protein VP39 120 369 IPR029063 -
Dere03g1729 369 FunFam O-methyltransferase family protein 21 119 - -
Dere03g1729 369 Coils Coil 16 36 - -
Dere03g1729 369 PANTHER O-METHYLTRANSFERASE 47 350 IPR016461 GO:0008168
Dere03g1729 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 369 IPR016461 GO:0008168
Dere03g1729 369 FunFam O-methyltransferase family protein 121 368 - -
Dere03g1729 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 359 IPR029063 -
Dere03g1729 369 Pfam Dimerisation domain 49 93 IPR012967 GO:0046983
Dere03g1729 369 PIRSF O-mtase 15 369 IPR016461 GO:0008168
Dere03g1729 369 CDD AdoMet_MTases 209 306 - -
Dere03g1729 369 Gene3D - 19 119 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1729 Dere-ChrDere03 28159333 28160599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1729 50 355 Monolignol Biosynthesis Gene Families AT5G54160 34.921 2.24e-60 197