Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1728 ATGAAGCTCTCAACCTTGAATGCTTTGCACAGACACCACGGTCAACATAGCAACATGGGAGAGACACAGATTAGAGAAAAAGAAATGAGGGAGAAGGAAGAAGAAGAAGCAGAAGCAGAAACGGAAATCTACAAATACATATTCGGGTTCGTTGAAATGGCTGTCGTAAAATGTGCCATCGACCTCAATATCGCAGACACCATAGAAACCCACGAGAGCCCCATGACGCTATCGCAGTTATCTTCAACCCTAAACTGCGACCCTTCCATGCTGTACCGCATCATGCGGTTCCTAACCCACCGAAACATCTTCAAACAGGTCACCACTGTCCATGGCTGCCTAGCCTACACCCACACCCCTCTTTCCCGCCTTCTGATAAAGAACAGCGAACGAAGCATGGCTGCTTTCGTAGCGCTCGAGGCTAGCCCGGTGATGCTGGCCCCATGGCAGCGTCTAAGTGCTCGGGTTTCGGCGAACGGAACGTCGTCGTTCGAGAAGGTTCACGGCGAGGACGTGTGGAGTTATGCGTCGGCGAATGCGGAGCACAGTGAGCTGATCAATGAGGCAATGGCGTGTGATGCTCGGAGGGGCATGAGGGAGATTGTGGAGCAGTGTGGCGAGGCGTTTGAGCGTGTGAGCAGTGTGGTGGATGTGGGTGGTGGGAATGGCACTTCCATGAAAGTGTTGGCTAGGGCTTTACCGGGCTTGAGATGCTTCAACTTTGATCTTCCACATGTTGTCTCTGCTGCACCGAAGTGGGATGGCGTAGAACATATCGCAGGTGACATGTTTGTCAGTGTTCCTAAAGCTGATGCTGCCTTTCTCATGTGGGTATTGCATGATTGGGGAGATGAAGAATGCATCCAGATCTTAAAGAAATGTAAGGCAGCTATTCCTCAGGAAAAGGGAAGGGTGATAATAGCTGAGGCAGTGATAGAAGAAGGATGGAAAGAAGACAAATTGAAGGACGTGGGGTTGATGCTGGACATGGTGATGATGGCTCACACTAATATAGGCAAAGAGAGGACTCTCAAGGAATGGGAATACGTTATCAAAGAGGCTGGATTCTCCAGATTCACTGTCAAAAATATCAATTCTGTGAAGTCTGTGATTATGGCTTTCCCATGA 1128 0.4947 MKLSTLNALHRHHGQHSNMGETQIREKEMREKEEEEAEAETEIYKYIFGFVEMAVVKCAIDLNIADTIETHESPMTLSQLSSTLNCDPSMLYRIMRFLTHRNIFKQVTTVHGCLAYTHTPLSRLLIKNSERSMAAFVALEASPVMLAPWQRLSARVSANGTSSFEKVHGEDVWSYASANAEHSELINEAMACDARRGMREIVEQCGEAFERVSSVVDVGGGNGTSMKVLARALPGLRCFNFDLPHVVSAAPKWDGVEHIAGDMFVSVPKADAAFLMWVLHDWGDEECIQILKKCKAAIPQEKGRVIIAEAVIEEGWKEDKLKDVGLMLDMVMMAHTNIGKERTLKEWEYVIKEAGFSRFTVKNINSVKSVIMAFP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1728 375 MobiDBLite consensus disorder prediction 14 36 - -
Dere03g1728 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 367 IPR029063 -
Dere03g1728 375 FunFam O-methyltransferase family protein 127 374 - -
Dere03g1728 375 CDD AdoMet_MTases 215 312 - -
Dere03g1728 375 PIRSF O-mtase 21 375 IPR016461 GO:0008168
Dere03g1728 375 SUPERFAMILY "Winged helix" DNA-binding domain 33 129 IPR036390 -
Dere03g1728 375 FunFam O-methyltransferase family protein 27 125 - -
Dere03g1728 375 PANTHER O-METHYLTRANSFERASE 53 356 IPR016461 GO:0008168
Dere03g1728 375 Pfam Dimerisation domain 55 99 IPR012967 GO:0046983
Dere03g1728 375 MobiDBLite consensus disorder prediction 1 36 - -
Dere03g1728 375 Pfam O-methyltransferase domain 149 357 IPR001077 GO:0008171
Dere03g1728 375 Gene3D Vaccinia Virus protein VP39 126 375 IPR029063 -
Dere03g1728 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 44 375 IPR016461 GO:0008168
Dere03g1728 375 Gene3D - 25 125 IPR036388 -
Dere03g1728 375 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1728 Dere-ChrDere03 28149645 28150920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1728 56 361 Monolignol Biosynthesis Gene Families AT5G54160 34.286 8.96e-61 198