Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1720 ATGGACTTCCAAGTGGTTGTTCTCGCCGGTGGCACCTCCAAGAAACTCCTCCCTCTCGTATCCAAGGAGGTTCCGAAAGCTTTACTTCCTGTGGCGAATAGGCCAGTTCTATCGTACGTTCTTGAGTTGTTGGAACTGAGTAACCTTAAAAAGCTTATAGTGGTAGTTGAAGGCGAAGATGCAGCTCTTCATGTTGGTGGTTGGATATCAGGGGCTTATGTTGATCGTTTAAATGTTGAGTTCATGATGTCATTCTGGATGCATTTAGGACATGCATCTCTGCTCCATGGGAAGTCTGTCATTGACAAATTAGTTGCTGCAGTCCCTGAGGATGTGGGAACAGCTGGCACAATTCGGGCCATCGCACACCACTTAACTGCTAAAGACATTTTGGTTGTAAGTGGTGATCTTGTTTCTGATGTACCTCCTGGTGCCATTGCTGCTGCTCATAGAAGACATGATGCAGTGGTTACTGCAATGCTTTGCCCTGCTCCTGTAAGTGGACCTTCAGAGTCAGGATCCTCTAGTGGGAAAGACAAAACCAAGAAAGTTGGTCGCCATGACTTGATTGGGCTGGATCCCACAAAACAGTTTTTACTTTATATAGCAACTGGAGCTGAAGTGGAAAAAGATCTTCGAATTCAAAAGAGCATACTTCGTGCAGTTGGCCAGATGGAAGTAAGAGCCGATCTCATGGATGCCCATATGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTTTAGATCAAAAGGCCACATTTCATAGCTTAAAGCAGGATGTGCTGCCTTATCTAGTCCGGAGCCAACTGAAATCAGAAGTATTGTTCAATGGTATACCTCAATCTGAAGACAATGGATTATCTCAGAGCAATGAACAAATGTTATCTCAAATCCTTTCTAATGCGTCTCATCCTACCTTTCATCAACAATGTGCACTGCGTCCTGATGGTTGTACTCCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCTGGAAGCAGCAAGTATTGTGCGCGCTTAAATTCTATTCAAGCATACAGTGACATAAACCGAGATGTGATAGGAGAAGCTAGTCATTTGTCAGGGTACTCCTTCTCTGCTCACAACAATATTATCCATCCTTCTGCAGAGCTTGGAGCAAAGACAACTGTAGGACCACATTGTATGCTGGGTGAAGGTTCACAGATGAGTGACAAATGCAGTGTGAAACGGTCTGTTATTGGTCGTCACTGCCGGATAGGTGCCAATGTTAAGATTGTTAATTCCATAGTTATGAATCATGTTACTATTGGAGATGGTTGTTCTATCCAAGGTTCTGTCATCTGCAGCAATGTACAGCTCCAAGAGCGGGTTGTGCTAAAAGATTGTCAAGTTGGGGCCGGTTTTGTGGTTACTGCTGGCAGCGAGTACAAAGGAGAAGTATTGGCTAGGAAATAA 1440 0.4375 MDFQVVVLAGGTSKKLLPLVSKEVPKALLPVANRPVLSYVLELLELSNLKKLIVVVEGEDAALHVGGWISGAYVDRLNVEFMMSFWMHLGHASLLHGKSVIDKLVAAVPEDVGTAGTIRAIAHHLTAKDILVVSGDLVSDVPPGAIAAAHRRHDAVVTAMLCPAPVSGPSESGSSSGKDKTKKVGRHDLIGLDPTKQFLLYIATGAEVEKDLRIQKSILRAVGQMEVRADLMDAHMYAFKRSVLLEVLDQKATFHSLKQDVLPYLVRSQLKSEVLFNGIPQSEDNGLSQSNEQMLSQILSNASHPTFHQQCALRPDGCTPVRRTHKCCVYIAGSSKYCARLNSIQAYSDINRDVIGEASHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMSDKCSVKRSVIGRHCRIGANVKIVNSIVMNHVTIGDGCSIQGSVICSNVQLQERVVLKDCQVGAGFVVTAGSEYKGEVLARK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1720 479 Gene3D Hexapeptide repeat proteins 365 472 - -
Dere03g1720 479 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 479 - -
Dere03g1720 479 Pfam Nucleotidyl transferase 6 173 IPR005835 GO:0009058
Dere03g1720 479 CDD LbH_eIF2B_gamma_C 390 470 - -
Dere03g1720 479 CDD eIF-2B_gamma_N 3 244 - -
Dere03g1720 479 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 364 IPR029044 -
Dere03g1720 479 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 445 IPR029044 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1720 3 470 Eukaryotic Initiation Factors Gene Family AT2G34970 23.611 8.27e-20 90.9