Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1694 ATGATAAACCCCACTCTTAGGAGTAGGATCCACATGGTGCAATCTTTCTCTGTTGTTTTCCTCTACTGCATGGCTTCTTCTGGTGGTAGTGGAGCTTCTTCTGGTTCCAGCACCAGCTATATTCAGAACTCTGGCTCTGAGGGAGATGTGCAGCAGCATATCATGGAAGAGAGGAAGAGGAAAAGAATGGTGTCCAATCGGGAATCGGCACGTCGATCCAGGATGAAAAAACAGCAACGCCTCGATGATTTGATTACACAAATGGGTCAGCTTAAGAATGACAATAATCAAATCATCACAAGCATTGACCTCACCACCAAGCTGTACTTAGACATTGAGGCAGAGAATGCAATTCTCAGGGTTCAGATGGCAGAGTTAAGCAATAGATTGCAGTCTCTCAACGAAATCATAGGTTTCATAAACTCAAGGAATTGCCTCTTTGATGACATTGGAGACACACAGATTGTTGATTTTGGCTTCATCAACCCGTGGAACTCCGTGTCTGTGAATCAACCAATCATGGTATCTGCTGACATGATGATGTAA 546 0.4377 MINPTLRSRIHMVQSFSVVFLYCMASSGGSGASSGSSTSYIQNSGSEGDVQQHIMEERKRKRMVSNRESARRSRMKKQQRLDDLITQMGQLKNDNNQIITSIDLTTKLYLDIEAENAILRVQMAELSNRLQSLNEIIGFINSRNCLFDDIGDTQIVDFGFINPWNSVSVNQPIMVSADMMM 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1694 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 56 119 IPR004827 GO:0003700|GO:0006355
Dere03g1694 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 61 76 IPR004827 GO:0003700|GO:0006355
Dere03g1694 181 MobiDBLite consensus disorder prediction 33 79 - -
Dere03g1694 181 FunFam BZIP transcription factor 56 107 - -
Dere03g1694 181 SUPERFAMILY Leucine zipper domain 58 110 IPR046347 GO:0003700|GO:0006355
Dere03g1694 181 Gene3D - 56 111 - -
Dere03g1694 181 Pfam bZIP transcription factor 58 110 IPR004827 GO:0003700|GO:0006355
Dere03g1694 181 SMART brlzneu 54 118 IPR004827 GO:0003700|GO:0006355
Dere03g1694 181 Coils Coil 74 94 - -
Dere03g1694 181 CDD bZIP_plant_GBF1 59 109 IPR045314 GO:0003700|GO:0006355
Dere03g1694 181 PANTHER BZIP TRANSCRIPTION FACTOR 44 24 178 - -
Dere03g1694 181 Coils Coil 109 136 - -
Dere03g1694 181 MobiDBLite consensus disorder prediction 33 50 - -
Dere03g1694 181 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1694 Dere-ChrDere03 27779307 27780019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1694 51 181 bZIP Transcription Factor Family AT4G34590 51.064 2.29e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere03g1694 bZIP_1 7.1e-10 CL0018