Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1686 ATGACTGGAAATTGTGGAGAATGTATTCATGGAAATGCTGATTTTAACCCAGCTGAGAAGACGAAGGCAAAGGCAAGAGCAGCCAGAGATGCAAAGAAGGCAGGAATGAATAGAGAAGCATCAGATGTTGGGGTTGGAGCTGGAGCATCAGCTGCAGCTACCTTCTGCACTGAGCACACTGCCATTACAACCACTAGCATTGCTACCAATAGCTTCATCTTAATTCCCTCCATTTCTGACTATGAAACAAATAGAGGCAATGGAATGGAAAGGGAGTTGTTGGGGCTGAGGATATTTATAGAAGGACAAGACATTAAAGTAAGCTACTGGCTCCGTCTCTGCGAATCGCGCCTCACTTCCGAATCTGAGACAATGGGGGCTTACAAGTACGTGTCGGAGTTATGGCGGAAGAAGCAGTCAGATGTGATGAGATTCTTGCAGAGGGTGAGGTGCTGGGAGTACCGTCAGCAGCCATCGATTGTGCGTCTTACAAGGCCGACCCGCCCCGACAAGGCTCGCCGCTTAGGGTATAAGGCTAAGCAGGGCTATGTGGTTTACCGTGTTCGCGTGAGGAGGGGTGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTATGGAAAGCCTACCAATCAAGGTGTTACCCAGCTCAAATTCCAACGCAGCAAGAGGTCTGTTGCTGAGGAACGAGCTGGTCGCAAGTTGGGTGGTTTGAGGGTTCTCAATTCCTACTGGGTCAATGAGGATTCAACCTACAAGTACTTCGAGATCATCCTGGTGGATGTTGCCCACAATGCCATTCGCAATGACCCAAGAATCAATTGGCTCTGCAACCCAGTCCACAAGCACAGGGAGCTCCGAGGCCTTACTTCTGCTGGAAAGAAATACAGGGGCTTACGTGGCAGGGGACATCTCTACCACAAAGCTCGCCCCTCTCGCAGGGCCACCTGGAAGAGAAACAACACCCTCTCTCTTCGTCGCTACCGTTGA 987 0.5066 MTGNCGECIHGNADFNPAEKTKAKARAARDAKKAGMNREASDVGVGAGASAAATFCTEHTAITTTSIATNSFILIPSISDYETNRGNGMERELLGLRIFIEGQDIKVSYWLRLCESRLTSESETMGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1686 328 PANTHER RIBOSOMAL PROTEIN L15 125 328 IPR000439 GO:0003735|GO:0005840|GO:0006412
Dere03g1686 328 SMART Ribosomal_L15e_2 126 317 IPR000439 GO:0003735|GO:0005840|GO:0006412
Dere03g1686 328 FunFam Ribosomal protein L15 125 328 - -
Dere03g1686 328 ProSitePatterns Ribosomal protein L15e signature. 170 193 IPR020925 GO:0003735|GO:0005840|GO:0006412
Dere03g1686 328 Pfam Ribosomal L15 126 314 IPR000439 GO:0003735|GO:0005840|GO:0006412
Dere03g1686 328 Gene3D Ribosomal protein l15e 125 328 IPR024794 GO:0003735|GO:0005840
Dere03g1686 328 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 125 319 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1686 Dere-ChrDere03 27690357 27695861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1686 125 328 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 92.157 2.65e-127 360