Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1679 ATGGATTTAAAAATGGAGGTGGTGAATCTTCTAACCTTCCCAGCAGTTTTGACAGCACTAATCTTTGTCCTTTCCCTTCATTTCATTACTAAATTTGTCAAAACCAGAAAAAATCCCAATCTCAATCTTCCTCCTGGAAGCTTAGGATGGCCTGTTGTTGGTGAGACCTTTAAGTTTGTGAGATCAGGTGTTAAGGGCAACCCAGAAAGGTTCATAAGAGAGAGAATGGAGAAATTTGACTCCAGGGTGTTCAAAACTTCAATGCTGGGAGAGCCTGTGGCTGTGTTCTGTGGGGTAGCTGGGAACAAGTTTTTATTTAGCAATGAGAACAAGAATGTTCAAGTGTGGTGGCCCACCTCTGTAACGAAGCTCTTGCGCTCCTCTTTGATCACTAAGGTTGGTTATGAAGCTAGGACCACGAGAAAGCTGCTTATGAGTTTCCTTAATCCAGAGGCACTCAGAAATTACTTAGCAAAAATGGACTCTGTTGCACACCGCCATATTGCCACTCATTGGCAAGGGAAAGAAGAAGTACTTGTGTATCCTACGGCGAAGCAATACACATTTGAATTGGCCTGTTGCTTATTTGCTAGCATTGAGGACTCCATCCATATGTCAAAACTTTCATCACATTTTGATGAATTCCTCAAAGGGATTATTAGCTTCCCTATCAATTTGCCTGGGACAAGGTTTCACTGTGCAAAGAGAGCTGCAAATGCAATTAGGGAAGATCTGAAACTTATCATAAAGAAAAGGAGAGTCGATTTGGAAGAGAAGGGGGCCTCACCTACCCAAGACCTTCTCTCACATTTGCTTATAACATCTGACAGCAGTGGGAGGTTTTTGACCGAAATGGAGATTATAGATAACATACTACTACTGCTCTTTGCTGGCCATGATACTTCTAGATCAGTCATATCATCCATCATCAGGTATCTTGGGCAGTTGCCTCAAGTTTATGAACTGGTGTTGGAAGAACAACTTGAAATTTCCAAGGGGAAGGAGGCTGGGCAGTTGTTGCAATGGGAGGATATTCAAAAAATGAAGTACTCGTGGAATGTTGCATCTGAAGTTCTACGACTATCTCCACCCGTGACTGGTTCTTACAGAGAAGCTTTAAACAATTTCACCTTTGCTGGTTATACCATCCCCAAAGGGTGGAAGTTGTTGTGGAGCACTGGTTCATCACACAAGGACCCAAAGTTCTTCCCAAATCCTGAAACTTTTGATGCTTCAAGGTTCGAAGGAGCAGGGCCTACACCCTTTTCATTTGTTCCATTTGGAGGAGGACCGAGAATGTGTATGGGACAAGAGTTTGCACGCCTAGAGATTCTCGTGTTCATGCATAACATTGTGAAAAGATTCAAGTGGGAGTTATTGATTCCTAATGAGAAGTTTCAGTATGATCCCATGCTAGAACCCTTAAAAGGACTTCCAATCCGTCTTCAACCTCTTCATATCTAG 1464 0.4255 MDLKMEVVNLLTFPAVLTALIFVLSLHFITKFVKTRKNPNLNLPPGSLGWPVVGETFKFVRSGVKGNPERFIRERMEKFDSRVFKTSMLGEPVAVFCGVAGNKFLFSNENKNVQVWWPTSVTKLLRSSLITKVGYEARTTRKLLMSFLNPEALRNYLAKMDSVAHRHIATHWQGKEEVLVYPTAKQYTFELACCLFASIEDSIHMSKLSSHFDEFLKGIISFPINLPGTRFHCAKRAANAIREDLKLIIKKRRVDLEEKGASPTQDLLSHLLITSDSSGRFLTEMEIIDNILLLLFAGHDTSRSVISSIIRYLGQLPQVYELVLEEQLEISKGKEAGQLLQWEDIQKMKYSWNVASEVLRLSPPVTGSYREALNNFTFAGYTIPKGWKLLWSTGSSHKDPKFFPNPETFDASRFEGAGPTPFSFVPFGGGPRMCMGQEFARLEILVFMHNIVKRFKWELLIPNEKFQYDPMLEPLKGLPIRLQPLHI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1679 487 PANTHER CYTOCHROME P450 26 39 470 - -
Dere03g1679 487 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 CDD CYP90-like 75 484 - -
Dere03g1679 487 FunFam Taxadiene 5-alpha hydroxylase 34 485 - -
Dere03g1679 487 SUPERFAMILY Cytochrome P450 40 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Dere03g1679 487 Gene3D Cytochrome P450 32 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1679 487 Pfam Cytochrome P450 44 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1679 Dere-ChrDere03 27634648 27637236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1679 42 389 Cytochrome P450 AT5G36110 45.299 4.23e-108 325