Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1667 ATGGAACGAAATTGGACTGTCGGCGGTGATTTCGTCTTGCTCCGTTGCTGCTCCGGCGATTGCGTCGTCCACTTCCTATGGCATGGCAGGGAGGTCGCTCGCTCGCTCTCTCTCGTCTTAAGAAAGATGAAGCTAGGATTTGTCCTCATTTCCCTTGTATTTTGCGGGTTAATAGCTAGATCAGTTGATTGTTCAAAACCCAAAGACCCATACCTCGGAGTTGCTCCTGAAGACGACAAGTATTACAAGTCGTCAGCTGTGATAAAATGTAAAGATGGATCCAAGGAATTCACCAAAGCTCAGCTCAATGACGACTTCTGTGACTGCACTGACGGCACGGATGAGCCAGGTACTTCAGCGTGTCCAAGTGGAAAATTTTATTGTCGGAATGCAGGACACGTTCCTCTTTTCCTACATTCATCCAGAGTGAATGATGGAATATGTGATTGCTGTGATGGAAGTGACGAATATGATGGTACAATAAAATGTCCAAATACTTGCTGGGAGGCTGGGAAAGTGGCTCGAGAAAAATTGAAAAAAAAGATTGCCACATATCAAGAAGGTGTCCTATTACGAAAGCAAGAAGTTGAACATGCAAAACTAGCTCTAGCAAATGATGAGGCAGAACTTTCAAAGTTGAAAAAAGAAGAAAGTATACTTAGAGGGATTGTTCAACAGCTAAAAGAGCATAAAGAACAGATAGAGAAGGCAGAGGAGAAGGAACGTTTGGAGAAGGAAAAAGAAGAGAAGCTGAAAAAGGAGGCTGAGGAGAAAGCTAATGAAGAGAAATCTAAACTGGATGGAGAAGCTGCAGGGCATAGAAATGAAGCTGTGAAGCAATCTGATGGCGAAGACAATAATGTGGCAAGCAACCATGATGAAAATGAACTTCTTAATGACACTCCTTTACATCAGGATGCAGTAGAGGACAAGAAGTTGGTCGATGTACTTGATAATGATGATGGAGCCACAGATAGTCCTGGAAGTAAAGGATCTTCAAATGAAGGAGTGGAAGAGAATGCAAGGGAAGATAAGGGAGAAACTGCTGAAACTGATTCCAAGGTTGGAAGGATGGAGTCTTCTGATGAAGCCATCAATACAGGAAATGGTGTACCTGAAAATACTGAGGGATTGTCAAAAGAAGAGTTGGGTCGGCTTGTAGCTTCTCGTTGGACAGGTGAAAATCCTGGTAAGCAAAGTGCTGAAGCTGATACAACAATTAATAAGGCTGATGAAGATAATGGAGATCTTCCAAAGGAGACAAATCATGAGGAATATGAAGGTTATGCATCTGAAACTGATGATGACAGGCACAAATATGATGATATAGATGTAGAAGATGAAATGGATGAAGACTTTCATGAGGAGGAGCATGATGACCTTAGTTCCTCGTACAAATCTGACACTGATACTGTACCAGACTTGTCAGATGACGTCACAGCAAGTAATCCTTCTTGGTTAGAGAAAATACAGAAAACTGTACGAAATATTTTTCAGGCTGTTAATTTATTCCAGACTCCAGTGAACCTGTCAGATTCTGCTCGAGTGCGCAAGGAGTATGATGAGTCAAGTACCAAATTATCTAAATTACGATCAAGAATATCAAGTTTGAAGCAAAAGCTAAAACATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGATCGTTGTTTTGAGAGCAAGCAGAACAAGTACACTTACAGTGTCTGCCCCTATAAAGAGGCTTCTCAGAAGGAGGGCTATAGCACCACAAGTTTGGGGCGTTGGGACAAATTTGAAGACTCCTACAGAGTTATGGTTTTTTCTAATGGTGATAAATGCTGGAATGGGCCTGATAGGAGTTTGAAGGTCAGGCTAAGATGTGGGTTGACAAATGAGATAACTGATGTAGATGAACCAAGCCGTTGCGAGTATGCAGCGTTATTGTCTACCCCATCCCTTTGCCATGAGGAGAAGCTCAAGGAGCTACAACACAAGCTAGAGTTGATGAATAAGGAACAACCACAAAACCATGATGAGCTGTGA 2028 0.4201 MERNWTVGGDFVLLRCCSGDCVVHFLWHGREVARSLSLVLRKMKLGFVLISLVFCGLIARSVDCSKPKDPYLGVAPEDDKYYKSSAVIKCKDGSKEFTKAQLNDDFCDCTDGTDEPGTSACPSGKFYCRNAGHVPLFLHSSRVNDGICDCCDGSDEYDGTIKCPNTCWEAGKVAREKLKKKIATYQEGVLLRKQEVEHAKLALANDEAELSKLKKEESILRGIVQQLKEHKEQIEKAEEKERLEKEKEEKLKKEAEEKANEEKSKLDGEAAGHRNEAVKQSDGEDNNVASNHDENELLNDTPLHQDAVEDKKLVDVLDNDDGATDSPGSKGSSNEGVEENAREDKGETAETDSKVGRMESSDEAINTGNGVPENTEGLSKEELGRLVASRWTGENPGKQSAEADTTINKADEDNGDLPKETNHEEYEGYASETDDDRHKYDDIDVEDEMDEDFHEEEHDDLSSSYKSDTDTVPDLSDDVTASNPSWLEKIQKTVRNIFQAVNLFQTPVNLSDSARVRKEYDESSTKLSKLRSRISSLKQKLKHDFGPEKEFYSFYDRCFESKQNKYTYSVCPYKEASQKEGYSTTSLGRWDKFEDSYRVMVFSNGDKCWNGPDRSLKVRLRCGLTNEITDVDEPSRCEYAALLSTPSLCHEEKLKELQHKLELMNKEQPQNHDEL 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1667 675 Pfam Glucosidase II beta subunit-like 55 212 IPR028146 -
Dere03g1667 675 MobiDBLite consensus disorder prediction 405 444 - -
Dere03g1667 675 Coils Coil 196 276 - -
Dere03g1667 675 Gene3D - 117 169 IPR036055 GO:0005515
Dere03g1667 675 MobiDBLite consensus disorder prediction 360 374 - -
Dere03g1667 675 CDD LDLa 121 156 IPR002172 GO:0005515
Dere03g1667 675 Gene3D - 551 649 IPR009011 -
Dere03g1667 675 MobiDBLite consensus disorder prediction 238 319 - -
Dere03g1667 675 MobiDBLite consensus disorder prediction 238 479 - -
Dere03g1667 675 Pfam Glucosidase II beta subunit-like protein 517 673 IPR036607 -
Dere03g1667 675 SUPERFAMILY Mannose 6-phosphate receptor domain 560 650 IPR009011 -
Dere03g1667 675 MobiDBLite consensus disorder prediction 336 359 - -
Dere03g1667 675 Coils Coil 647 667 - -
Dere03g1667 675 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 47 675 IPR039794 -
Dere03g1667 675 Coils Coil 520 540 - -
Dere03g1667 675 ProSiteProfiles MRH domain profile. 556 651 IPR044865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1667 Dere-ChrDere03 27503177 27518794 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1667 65 675 Calmodulin-binding Proteins AT5G56360 57.121 0.0 626