Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1639 ATGAGTGTGTGCGGAATATACGAATTTTTTGGATCAGTTCTAACTTCGTATTGTGAGCAAAAGTTTAGTACAAAGAGTTATACTTCTTCTACGAGATCTCTAAGCTCTATCTATTCCAGAGCTCATCTTTTCAAGAAACAGTTGCTTTGGCTCCTCCTCCTGTCTCTTTCACCAAACACTGTTCTGGGTTATTATTCCATTAATTGCCTTCCCATTGCTTTGCCATCACTATATACTTTAAGATTATTGGTATGGGATGGGGCTGTTTCCGTCATTGATTCTTCTGCTGGTGAAGCTCTGCATCATCGGCTCTGCTTTGGGAGTCCATGGATCCAGAGCGCAACTTTCTGCTGGGTTTTGAACCCATTATCTCACCGTCCACTCTTATTCTTATGGGGCGATGTGTCCTTAGAACCAAAGGATATTGGCTCGACGGGCTACAATGTGGCTGACAAATTTGGTGACCATGGTTTCCTAAAGTTCATGATTTTCCCCAACTGCAGTACCTATTATTTCAGGTTCACTATATCACCATCTCCAGCATTCTTTCCTGTCATTCCTACTAGAGAAGAAACTCCAGGACCTGGTCCCATCCAGCATGGAGAGTCATGGGGAAGTAGTGCACCTAGCTCACCATCAGATCCAGATGCTTTTGCTGTCACCCCATCCCCGGAAACCATGCCAGTGCATCCTTCTGCCAAAAAATCATGGAGAGCTGTTGCCCCAAGCACTCCAGCAGTATCAAATGGGCCCTTATTTCACCTTCCATTTACATTATCACCTCCCACATCAGCTCCGATGCAGGAGAAGATAAGAGGGAGGGAGCCATCTGCATCTCCAAGCACCAGTGCTACAATATTATCACCGCCATCATATAAGGTAGTTTCTTCACCCTCAACTTTGCAAGGGCAAGTGCCACCGTCTGTACAAAGGAAAGAACCTGCTTTGAGGCCTCCAGTCTCCACAATGGATCCCCCAGTACCTTCTATCAATATGCCTAAAAACTTACCAGTTGGCCAGCCAATTGTACATGATTTGCCGCCTGGAAGGAATACAAATAGGAGTCACAACATAGAGCCTGTTTCACCAGCCCCAGTTGCAATACCTTATGTGAATTTGCCCAAAAATTCCCCTGGCAGTCCACCAACTGAAGATGGAAGTTTGCCACCAGTAGTTCGCAAAAGGGATGTAAATAAAGGTCACGCCGAAGAGCCAGCTTTACCAGGCATCTCACCAGTCAGCCAGCCATCTCAACATGGAAGTTTGCCTCCTAGTGTCCAGAGTAGGAACCAGAGTAGGAACACAAGTATGAATCACACCTTGGAGCCACTTTCACCATCCTCACTTGCCATACCTCCTGCCGTTTTGCCAAAAATTTCTCCAGTCAGCCAACCAACTACACATGGAAGTTTGCCACCTAATGTTCATAAAAGAACGCCAAATGAGGGTCACACCCCTGAGCCAATTTCCCCAGTATCTGTTGCTTCCTCCCCATGGAATGTGGGTCACAATCCACCATTAGCTCACCAAATTTCCACAAATTTAACTCCACCCATAGTACCTGCACCAGTTACATCACCAACAAGTGCATTTCCAGTAAACCCACCATCTGTTCACCCAGTGATACCAGCAGTTTCTCCATCAGAATTTCCAGCCCCTGTTGTCTCTCCTGCATCAACTCCTTCCAGAACCTTCAATTGGAAAAATGGTGGAGCACCTGTTGCTGCACCTTTGTATAAATCACCAAAGCCACTTCCAGCTGTAATTCATTCCCCTGCTCAAGCCCCTGCTGCACATAAAGCTGTTCAAGAGGCTCCTAAGCCATTGGTTTCATCTCCTAAATCTCCTTTCAAAAAAGGATTGCATTCTCCTGCATCTTCACCTTTGGCCTCATTTCATAAGCATCATGGTAAAAGGAACACAGTCAGCAGTCCTGCTCCTGTGTCATCGTATCCGGTCTCTCCTACTTCAATAAATCAAGGGCAAGCAATACCTCCCTTAGTACATCCAACAAGTGGTCGAATGCATAATGCTCCACCACCAGAGAACCCAGTACCATTTCTTCCTCCAAAAGTGTCTCCTTCTGTGTCTTCTTCCAAGAGCCCTAAGACATCAGTCTTGCCTCGAGTTCAAGCACTTCCGCCTCCACCTCCTAATGAAGATTGTTTATCAATTGTTTGTTCGGAGCCCTATACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTCTTGCCTATGCAAGTTGGTCTTCGCCTTGGTGTTTCTCTCTATACATTCTTCCCTTTGGTTTCAGAACTGGCTTCTGAAATTGCCACTGGGGTTTTAATGAAGCAAAGTCAAGTTCGCATAATGGGGGCTAAATCAGCAAATCAGCAACCAGAGAAAACTGATGTCCTAATAGATTTGGTTCCACTGGGGGAAAATTTTGATAACACTACAGCTTTTTTGACTTCTGACAGATTTTGGCATAAACGGGTTGTCATAAAAGCTTCTTACTTTGGTGACTATGAAGTGTTATATGTGAGCTATCCAGGTTTACCGCCATCACCTCCTTTACCACCAAGCATTACAATGATAGATGGTGGCCCATATTCCAATAATGGCAATAATGGAAGGACAATAAAGCCCCTTGGGGTTGACATACACAAGAGGCAGCACAAACGTGGGCTTAGTGGTGGCATAATTGCCATTATTTCTCTTTCAGCTTTTGTAGCTCTGGTCTTATGCTCTGCTGCTGCTTGGGTCTTGTTGTTCAAGCATAGAGATCATGTATCTCAAGCAGCATCGACCCCAAGGGTTTTGCCACCTTCTCTTTCCAAAACCCCAGGCACTGCTGGGTCATTGACTGGAGGTGGGCCAGGTTCTGCTTCTTCATCATTTCAATCTAGCATTGCAGCTTATAAAGGTTCTGCCAAGACTTTCAGTATGAGTGACATTGAGAGAGCCACTGATAACTTTCATGCCTCAAGAATACTAGGGGAAGGTGGTTTTGGGCGTGTTTATAGTGGTACCCTTGAAGATGGGATAAAAGTGGCAGTCAAGGTTCTAAAGAGGGAAGATCATCACGGTGATCGTGAATTTTTGGCTGAAGTTGAAATGCTCAGCCGTCTTCATCATAGAAATCTGGTCAAGTTGATAGGTATATGTACAGAGGACAGCTTCCGCTGCTTGGTCTATGAACTCATTCCAAATGGCAGTGTGGAGTCCCATTTACATGGAGTTGACAAGGAGAGCAGTCCAATTGATTGGGGTGCCCGGATGAAGATAGCTCTTGGTGCTGCTCGTGGACTGGCTTATCTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAGTCTAGCAACATCTTGTTGGGAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTAGAATAGCAACAGAAGAGGAGAACAGACATATATCAACACGTGTCATGGGAACCTTCGGTTATGTAGCTCCAGAGTATGCGATGACTGGGCATCTTCTAGTAAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTCGAGCTTTTGACTGGAAGAAAGCCAGTAGACATGTCACAACCTCCTGGTCAAGAGAACCTTGTTGCATGGGCCCGCCCTCTCCTGACAAGCAAAGAAGGACTTGAAGTGATAATAGATCCATCTCTTGGATCTCATGTACCTTTTGATAGTGTGGCTAAAGTTGCAGCCATAGCTTCAATGTGTGTGCAACCAGAGGTATCAAACCGTCCTTTCATGGGCGAGGTTGTTCAGGCCTTAAAACTTGTGTGTAATGAATGTGATGAAGCAAAAGAAGCATGTTCACGAAGTTCTAGCAAGGAGGATTTGTCTGTTGATTTGGATATGGGAGTCAGTACTGCTTCTGGACAACTACCAGATAATTTCCAAAGCCAACACACAGCTACCAGTTATGAATGTGCAGTAGATATCGAAAGGGGGTTATCGGCATCAGAATTATTCAGTTCATCAGCCAGGTTTGGAAGGCAGGCGTCCGCATCATTTAGAAGACACTCTTATTCAGGGCCTTTGAGAACTGGAAGAAGCAGACGATTGTGGCAGATGTTTAGAAGGCTTTCTGGTGGTAGTGTCAGTGAACATGGAATTATGTACAAGTTATGA 4137 0.4508 MSVCGIYEFFGSVLTSYCEQKFSTKSYTSSTRSLSSIYSRAHLFKKQLLWLLLLSLSPNTVLGYYSINCLPIALPSLYTLRLLVWDGAVSVIDSSAGEALHHRLCFGSPWIQSATFCWVLNPLSHRPLLFLWGDVSLEPKDIGSTGYNVADKFGDHGFLKFMIFPNCSTYYFRFTISPSPAFFPVIPTREETPGPGPIQHGESWGSSAPSSPSDPDAFAVTPSPETMPVHPSAKKSWRAVAPSTPAVSNGPLFHLPFTLSPPTSAPMQEKIRGREPSASPSTSATILSPPSYKVVSSPSTLQGQVPPSVQRKEPALRPPVSTMDPPVPSINMPKNLPVGQPIVHDLPPGRNTNRSHNIEPVSPAPVAIPYVNLPKNSPGSPPTEDGSLPPVVRKRDVNKGHAEEPALPGISPVSQPSQHGSLPPSVQSRNQSRNTSMNHTLEPLSPSSLAIPPAVLPKISPVSQPTTHGSLPPNVHKRTPNEGHTPEPISPVSVASSPWNVGHNPPLAHQISTNLTPPIVPAPVTSPTSAFPVNPPSVHPVIPAVSPSEFPAPVVSPASTPSRTFNWKNGGAPVAAPLYKSPKPLPAVIHSPAQAPAAHKAVQEAPKPLVSSPKSPFKKGLHSPASSPLASFHKHHGKRNTVSSPAPVSSYPVSPTSINQGQAIPPLVHPTSGRMHNAPPPENPVPFLPPKVSPSVSSSKSPKTSVLPRVQALPPPPPNEDCLSIVCSEPYTNSPPGAPCRCVLPMQVGLRLGVSLYTFFPLVSELASEIATGVLMKQSQVRIMGAKSANQQPEKTDVLIDLVPLGENFDNTTAFLTSDRFWHKRVVIKASYFGDYEVLYVSYPGLPPSPPLPPSITMIDGGPYSNNGNNGRTIKPLGVDIHKRQHKRGLSGGIIAIISLSAFVALVLCSAAAWVLLFKHRDHVSQAASTPRVLPPSLSKTPGTAGSLTGGGPGSASSSFQSSIAAYKGSAKTFSMSDIERATDNFHASRILGEGGFGRVYSGTLEDGIKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEDSFRCLVYELIPNGSVESHLHGVDKESSPIDWGARMKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLGDDFTPKVSDFGLARIATEEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKEGLEVIIDPSLGSHVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEACSRSSSKEDLSVDLDMGVSTASGQLPDNFQSQHTATSYECAVDIERGLSASELFSSSARFGRQASASFRRHSYSGPLRTGRSRRLWQMFRRLSGGSVSEHGIMYKL 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1639 1378 Gene3D Phosphorylase Kinase; domain 1 958 1061 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 411 445 - -
Dere03g1639 1378 ProSiteProfiles Protein kinase domain profile. 986 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1639 1378 FunFam Receptor-like serine/threonine-protein kinase ALE2 1062 1280 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 642 666 - -
Dere03g1639 1378 Pfam Protein tyrosine and serine/threonine kinase 988 1259 IPR001245 GO:0004672|GO:0006468
Dere03g1639 1378 SUPERFAMILY Protein kinase-like (PK-like) 967 1259 IPR011009 -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 186 242 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 275 307 - -
Dere03g1639 1378 PANTHER OS01G0750732 PROTEIN 714 1287 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 369 498 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 677 691 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 344 363 - -
Dere03g1639 1378 CDD STKc_IRAK 992 1260 - -
Dere03g1639 1378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
Dere03g1639 1378 MobiDBLite consensus disorder prediction 203 217 - -
Dere03g1639 1378 ProSitePatterns Protein kinases ATP-binding region signature. 992 1014 IPR017441 GO:0005524
Dere03g1639 1378 FunFam receptor-like serine/threonine-protein kinase ALE2 959 1061 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 930 956 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 460 474 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 929 956 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 692 706 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 258 326 - -
Dere03g1639 1378 MobiDBLite consensus disorder prediction 594 715 - -
Dere03g1639 1378 Gene3D Transferase(Phosphotransferase) domain 1 1062 1284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1639 Dere-ChrDere03 27065070 27073562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1639 304 1373 Receptor kinase-like Gene Family AT5G56890 50.134 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dere03g1639 PK_Tyr_Ser-Thr 4.8e-48 CL0016