Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1614 ATGGGAGGTTGGGGAGGTGGGGAGTGGCGAGACTGTGAGTTTAAGGATTTCCGTAGAGATGTCAGAGACAAGTGCTGCCACAGTCGCAGCTTAGCTGCTGCAACAGAAGCAGTAGCAACAGAGTGCTTTCCTCCTCTCCACCCTTATCTTTGGTTAATGATGAACGGAGGAAGGAGCAGGTTTCCCTTCACTCCATCTCAGTGGCAAGAGCTTGAACATCAAGCCCTCATTTTCAAGTACATGGCTTCAGGTATCCCCATTCCTCCTGATCTTCTCTTCTCCATCAAAAGGACCTCTATGGACTCTCCTCTTTCTTCAAGGCTTTTCTCTCACCCACCTCAACAGTTTGGGTGGAACTATTTGGAGATGGGTTTGGGAAGAAAGATAGACACCGAGCCAGGAAGATGCAGGAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAGGCTTACCCAAATTCCAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTATGAGAAAGCCCTTGCAGCAAGGTTTCAAAACAACAGCACCACCGCCGCCTGCCAACACAAATTCCTCAACAATCACCAGAAATAATACCCCTTCCCTGTCCCTCACCACTCTATCATCCCTCTCACCTCTCTCTGAGACCACCCACCATCAGTCCTTCCTTTATCATCGTCATCATCACCACCACCAACCTTCAATGTCTTCTTCGTCTGGGATTGGCTTCTCATTTCAGGAAGATAGTGCTTCTCACTTGAATAATGGGTATGTTTATGATGGACTGAAAGAGGAGGTGGACGAGCATGCTTTCTTCACAGAACCTTCTGGGACCATGAGAAGCTTCTCTGCTTCATCAATGGATATGGATGATTCCTCTTGGCATCTCACACCGCTCACAATGAGCTCCTCGTCATCTTCCTCGAAACAGAGAACCTGCTCTGGTTTGTCCAACGAGAACTCTTCTTACTTGCAGCTTCAGAATCAGAACCTTAACGACTGCGTGAATCAGCAAGAGCAAGAGCAAGTTTCCTACATGCTGGGATTGGGAAAATTAGAAGAGCCTCAAAATCAGAAGACTGTTCATCGTTTCTTTGACGAATGGCCCCACAAAAGCAAACACTCGTGGCTTGATTTGGACGATAAATCATCCACAACCCAACTTTCAATTTCCATTCCCACATCTGAACATGACCACTTTCCACCCTTCAACTCCAGAACCCACCGAGATGACATTCAATGGCTTTTATCTGTTTATGTTCATCCTTCTTCTGCGTCAGTGCTTCCTGGTTTTTACAATATTGTGTGCCTCATGGCCCCAGGATATTACCACTTTCTCACTTCTCAGACATGGGAATCTGTTAATCATTTGAGCTGGTTAGACCCCTCTGCGTAA 1389 0.4665 MGGWGGGEWRDCEFKDFRRDVRDKCCHSRSLAAATEAVATECFPPLHPYLWLMMNGGRSRFPFTPSQWQELEHQALIFKYMASGIPIPPDLLFSIKRTSMDSPLSSRLFSHPPQQFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRMRKPLQQGFKTTAPPPPANTNSSTITRNNTPSLSLTTLSSLSPLSETTHHQSFLYHRHHHHHQPSMSSSSGIGFSFQEDSASHLNNGYVYDGLKEEVDEHAFFTEPSGTMRSFSASSMDMDDSSWHLTPLTMSSSSSSSKQRTCSGLSNENSSYLQLQNQNLNDCVNQQEQEQVSYMLGLGKLEEPQNQKTVHRFFDEWPHKSKHSWLDLDDKSSTTQLSISIPTSEHDHFPPFNSRTHRDDIQWLLSVYVHPSSASVLPGFYNIVCLMAPGYYHFLTSQTWESVNHLSWLDPSA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1614 462 MobiDBLite consensus disorder prediction 294 315 - -
Dere03g1614 462 MobiDBLite consensus disorder prediction 175 203 - -
Dere03g1614 462 Pfam WRC 132 171 IPR014977 -
Dere03g1614 462 ProSiteProfiles WRC domain profile. 130 174 IPR014977 -
Dere03g1614 462 SMART QLQ_2 61 97 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere03g1614 462 Pfam QLQ 62 95 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere03g1614 462 MobiDBLite consensus disorder prediction 179 203 - -
Dere03g1614 462 PANTHER GROWTH-REGULATING FACTOR 5 44 396 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere03g1614 462 ProSiteProfiles QLQ domain profile. 62 97 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1614 Dere-ChrDere03 26710847 26713404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1614 60 174 GRF Transcription Factor Family AT3G13960 69.565 2.46e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere03g1614 WRC 9.2e-19 No_clan