Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1597 ATGCTTACGTGCATCGCTCGTCCTAAGAAACCCGGGAATGATTCGTTGAGTCAGCCCGAAGATTCCGATTCTAAAAACCAAGCCATCAAATCCCTTACCTCTCAGCTTAAGGATATGGCGTTGAAGGCATCAGGGGCGTACAAGCATTGTAGCCCCTGCACGGGACCACCCACGCAGACCCGACTCCGGAGCAATACAGAGTCAGACACGGACTCGGACCGGTTCCGGTGGTCGTACCGGAGAACAGGGAGCTCAAGCTCGACAACGACGAGGGCATGGGGGAAGGAGATGGAAGCGAGGCTGAAGGGGATTTCGAGTGGAGAAGGGACGCCGAATTCGGCAAGTGGACGGCGAGTGGAGCCGGTGGTGTTGTTCGTGGAAGAGAACGAACCTAAAGAGTGGGTGGCACAGGTGGAACCCGGCGTTCTGATCACCTTTGTTTCGCTTCCGCGTGGCGGGAACGATCTGAAGCGAATACGGTTCAGTCGCGAGATTTTCAACAAGTGGCAAGCTCAAAGATGGTGGGCAGAGAATTATGACAAGGTTATGGAGCTTTACAATGTTCAAAGGTTTAACCGCCAAGCTTTCCCTCTTCCAACGCCACCAAGATCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGACAGCCCAGTCACACCTCCACTAACCAGGGAACGGTTACCTCGTAACTTGTACCGTCCAACAGGGATGGGGATGGGATACTCATCCTCGGATTCCTTTGATCATCAATCAATGCAATCCCGGCATCACTATGACTCTGGTGGTATGAACTCAACCCCTAAAGTCTCCACCATTAGCGCAGCCAAGACAGAAGTATCATCAATGGACGCGTCCATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCCGGGGATCTCTCAATCAGCAATGCCAGTGACCTCGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTATATTACCATCAGAGCGTTGCCGGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTGTGGTGGGAAGAGAACCGCGCCAGAATACATGAACAATACTTGTTATTTTCTCGGATGCGGGTGGAACCCAAGTCTGCTATCATCACCCTATTCTCTATGTCTGGCACCCAAAGCTTGATGGAGAAAAAGCAAGGACGCAGTAGGTTTGACACTAAAGTAAAGAAATATCGGGCCGCGATGGCTTCATCTTTCAATTCCAAGCCTAAAATCGTGAATGGACTTGCTGGTTATGTCCTCGAAGATGTTCCACATTTGTTCAATTACCTTTCGAATCTTCCAGTACGTCGTCGTTCTGTTTCTACTTTTTTATTGCACTCTTGCTTTTCCTCCATCAAGCTTCAAGTGCCTACAACAAAGAATAGGATGATAATGGCTGACTTGAGTTCCTGCTACATGGAATGTGGCAAAGATAGAGTGACGAAGATGATGGTCCGGTTGATGGAATAG 1503 0.4963 MLTCIARPKKPGNDSLSQPEDSDSKNQAIKSLTSQLKDMALKASGAYKHCSPCTGPPTQTRLRSNTESDTDSDRFRWSYRRTGSSSSTTTRAWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPTPPRSEDESSKLESAEDSPVTPPLTRERLPRNLYRPTGMGMGYSSSDSFDHQSMQSRHHYDSGGMNSTPKVSTISAAKTEVSSMDASIRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYLLFSRMRVEPKSAIITLFSMSGTQSLMEKKQGRSRFDTKVKKYRAAMASSFNSKPKIVNGLAGYVLEDVPHLFNYLSNLPVRRRSVSTFLLHSCFSSIKLQVPTTKNRMIMADLSSCYMECGKDRVTKMMVRLME 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1597 500 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Dere03g1597 500 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Dere03g1597 500 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Dere03g1597 500 Pfam Transcription factor BRX N-terminal domain 27 53 IPR027988 -
Dere03g1597 500 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Dere03g1597 500 MobiDBLite consensus disorder prediction 195 268 - -
Dere03g1597 500 MobiDBLite consensus disorder prediction 281 302 - -
Dere03g1597 500 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Dere03g1597 500 MobiDBLite consensus disorder prediction 15 38 - -
Dere03g1597 500 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1597 Dere-ChrDere03 26504908 26513465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1597 1 366 Major Intrinsic Protein MIP AT1G31880 44.186 4.05e-93 285