Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1593 ATGGCTGAGTTAGATGCTAGAAGAGCAGAGGTTCTTGGAAATGCAGCTAGAATTATCCAGAGGCAGATACATACTCATATTGCACACAAGGAATTCATTAAATTGCGTGAAGCAGCAATTTATTTGCAATCCAATTTACGAGCAGTGGTTTGTGCTGTCTTGTGGATGGCATTAGATGTCGATGGATTTGTAGGCAAATTGGCTCGAAAGCTCTATGAGCAGTTGCGACGTGAAATGGTGGCACTGAAGACAGGTCTAGGGGCAATGAAGGCTCGCAATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCTTATCCAGGCTGCAAGAGAAACAGGGGCCCTTAAAGACACAAAAGACAAGCTAGAAAAGTGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAGCTGATTTGGAAGAGGAAAAAGCACAAGAAATCACTAAGTTACAAGATGCTTTGTGTGCAATGCAATTACAAGTAGAAGAAGCAAATGACAGGATCATCAAAGAACGTGAGGCAGCTCAAAAAGCCATTGAAGATGCACCTGCTGTTATTAAAGAAACTCCAGTTATAATTCAAGATACTGAAAAAATTAATTCCTTAATGGCTAAGGTCAATAGTTTGAAGGAATCACTGCTATTGGAAAGAGAGGCTAGAGAAGAAGTCAAAAAAGCTCATGCAGAGGCTGAGATTAGAAATGCTGAGCTGATGAAAAAAGTTAAAGATTCTGAGCGTAAAGTGGATCAACTCCAGGAATTGGTTCTGAGGTTAGAAGACAAAATTTCCAATGTAGAATCAGAAAATCAAGTTCTTCGTCAGCAAGCATTGGCTGTATCACCAACTGGTAAAGCTCTGTCCACAAGACCAAAATCAGTGATTATTCAGACGTACATGAACCTGAATCTGAGGGAAAACCACAAAAGTCTCTCCAATGAGAAGCAACAAGGACTGAGGGCATCTCCACAAACTGCTGCATTTTCATTTCTAAATGGTAGAGGATTTGGTAGATTGGATGATTTATGGCAAGTCGAGGCAAAATATCCTGCACTGCTGTTTAAGCAGCAGCTTACAGCCTTCCTCGAAAAAATATATGGAATGATAAGAGACAGTTTAAAAAAGGAGATCTCTCCATTGCTTGGATTGTGTATTCAGGCTTCAAGGACCTCACGTCAAAGTTTAGTAAAAGGACGCTCACTTGCCAATGCAGTCGCTCAGCAAGCTTTAAATGCTCATTGCCGAAGAATTGTGGACAGCTTAAACAATTATCTGAAGATAATGAAAGCAAACTACGTTCCTCCTTTCTTAGTCTGTAAAGTGTTCAGTCAAACTTTCTCTTTTATCAATGTTCAATTATTCAACAGTCTTTTGTTGCGTCGTGAGTGTTGTTCATTCAGTAATGGGGAGTATGTGGAGACTGGTTTGGCTGAATTAGAACAATGGTGCATTGTGGCAACTGAGGAGTATGCTGGCACAGCTTGGGAGGAACTGAAGCATCTTAAGCAGGCAGTAGGATTTTTGGTTATATCAAGCATGAGAGCTATAATGTCTGAGGACTCTAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCAAGCATTCCGTTTTCGGTGGATGATATTTCCAAATCAATGCAACAAGTAGATGTAGCTGATGTGGATCCGCCTCCATTAATACGTGAGAACTCAGGATTTGGTTTCTTACTAGCACGCTCAGAGTGA 1743 0.4039 MAELDARRAEVLGNAARIIQRQIHTHIAHKEFIKLREAAIYLQSNLRAVVCAVLWMALDVDGFVGKLARKLYEQLRREMVALKTGLGAMKARNEFRFRKQTKAAILIQAARETGALKDTKDKLEKCVEELTWRLQIEKRLRADLEEEKAQEITKLQDALCAMQLQVEEANDRIIKEREAAQKAIEDAPAVIKETPVIIQDTEKINSLMAKVNSLKESLLLEREAREEVKKAHAEAEIRNAELMKKVKDSERKVDQLQELVLRLEDKISNVESENQVLRQQALAVSPTGKALSTRPKSVIIQTYMNLNLRENHKSLSNEKQQGLRASPQTAAFSFLNGRGFGRLDDLWQVEAKYPALLFKQQLTAFLEKIYGMIRDSLKKEISPLLGLCIQASRTSRQSLVKGRSLANAVAQQALNAHCRRIVDSLNNYLKIMKANYVPPFLVCKVFSQTFSFINVQLFNSLLLRRECCSFSNGEYVETGLAELEQWCIVATEEYAGTAWEELKHLKQAVGFLVISSMRAIMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVDVADVDPPPLIRENSGFGFLLARSE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1593 580 Coils Coil 166 186 - -
Dere03g1593 580 PANTHER MYOSIN 1 538 - -
Dere03g1593 580 SMART DIL_2 444 539 IPR002710 -
Dere03g1593 580 Pfam DIL domain 445 521 IPR002710 -
Dere03g1593 580 Coils Coil 225 280 - -
Dere03g1593 580 Coils Coil 127 161 - -
Dere03g1593 580 ProSiteProfiles Dilute domain profile. 341 580 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1593 Dere-ChrDere03 26452210 26468422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1593 309 580 Myosins gene family AT5G20490 66.352 5.97e-128 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1593 03 26452210 26468422 Dere03g1593 03 26452210 26468422 ECH