Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1592 ATGGTAACTCCGGGTGAAACCTTACCTGTTCAGTTGTCCGCACCAGTGAACATCATTGTTGTCACAAATATCTCTAAGATTTATCCCAAGGATAATGAAGCTCCTCCTGGAGGTGTGGATGACATGACAAAACTGTCATATTTGCATGAACCAGGAGTTCTCCACAATTTGTCTTCTAGATATGAACTCAATGAAATCTATACCTATACTGGAAATATACTGATTGCAATAAATCCATTCCAAAGGGCGATGATCAATGAGGGAAAAAGCAACTCAATCCTGGTTAGTGGTGAAAGTGGGGCTGGTAAGACGGAGACAACAAAGATGCTCATGCGATATCTTGCATACCTTGGGGGCGATCTGGATCGGTTTGGTAAATTTGTCGAAATCCAGTTTGACAAGAAGGGGAGGATCTCTGGGGCAGCTATGCGAACTTACTTGCTTGAGAGGTCTCGTGTTTGCCAAATTTCTGATCCTGAAAGAAATTACCATTGTTTTTACCTCCTTTGCGCTGCACCAGCTGAGAAGTATAAGCTGGGGAGTCCAAGCTCCTTTCATTACTTAAATCAATCCAATTGCCACGAACTGGATGGAATAGATGACACACATGAATATCTTGCAACACGAAGGGCAATGGATGTTGTTGGAATCAGTGAGGAAGAGCTGGATGCAATTTTTAGGGTTGTTGCGGCAATTCTGCACCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCTTCCATCAAAGATGAGAAGTCAAGATTTCATCTTAACATGACTGCTGAACTTCTAAAGTGTGATGCTAAGAACTTGGAAGATGCACTAATCAACCGTGTGATGGTAACACCTGAGGAGGTCATTACAAGAACCCTCGATCCTGTTGCAGCTGTTGGTAGCAGGGATGCATTAGCCAAAACAATTTATTCACGTTTATTTGATTGGCTTGTGGAGAAGATTAACATTTCAATTGGGCAGGATCCTAATTCAAAATCTATCATTGGAGTTCTAGATATTTATGGGTTTGAAAGTTTTAAGTTCAATAGTTCTGTATCAATTTTACAAATGAAAAGCTGCAACAACACTTCAATCAGTTTTCTTAATCATGTCTTTAAAATGGAACAAGAAGAATACACCAAGGAAGAGATTGATTGGAGTTACATAGAGTTTGTTGACAACCAAGACGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCGCTTCTTGATGAAGCCTGTATGTTTCCTAAGTCCGCACACGAAACGTTTGTTCAGAAGTTGTACCAGACATTCAAAAACGACAAGTGCTTTATCAAACCTAAACTTTCTCGAACTAGCTTTACCATATCTCATTATGCAGGGGAGGTTATGTATTTGGCTGATATGTTTCTTGACAAAAACAAGGATTATATGGTCGCAGAACATCAGGATCTGCTCACAGCCTCAAAATGCTCGTTTGTAGCAGGCTTATTCCCTTCTTCTCCAGAGGAATCATCAAAATCATCCAAGTTCTCTTCGATTGGATCTCGCTTTAAGGTAATCCCATTATCTCTTGAAAATCCAAACAACTGGATGATATAG 1593 0.3992 MVTPGETLPVQLSAPVNIIVVTNISKIYPKDNEAPPGGVDDMTKLSYLHEPGVLHNLSSRYELNEIYTYTGNILIAINPFQRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGDLDRFGKFVEIQFDKKGRISGAAMRTYLLERSRVCQISDPERNYHCFYLLCAAPAEKYKLGSPSSFHYLNQSNCHELDGIDDTHEYLATRRAMDVVGISEEELDAIFRVVAAILHLGNIEFAKGEEIDSSSIKDEKSRFHLNMTAELLKCDAKNLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKFNSSVSILQMKSCNNTSISFLNHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSAHETFVQKLYQTFKNDKCFIKPKLSRTSFTISHYAGEVMYLADMFLDKNKDYMVAEHQDLLTASKCSFVAGLFPSSPEESSKSSKFSSIGSRFKVIPLSLENPNNWMI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1592 530 Gene3D Kinesin motor domain 123 344 IPR036961 -
Dere03g1592 530 FunFam Myosin 2 218 334 - -
Dere03g1592 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 516 IPR027417 -
Dere03g1592 530 PRINTS Myosin heavy chain signature 388 416 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere03g1592 530 PRINTS Myosin heavy chain signature 67 86 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere03g1592 530 SMART MYSc_2a 31 528 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere03g1592 530 PANTHER MYOSIN 31 82 - -
Dere03g1592 530 Pfam Myosin head (motor domain) 123 505 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere03g1592 530 Pfam Myosin head (motor domain) 39 82 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere03g1592 530 Gene3D Myosin VI head, motor domain, U50 subdomain 218 507 - -
Dere03g1592 530 Gene3D - 161 216 - -
Dere03g1592 530 FunFam Myosin heavy chain 161 213 - -
Dere03g1592 530 Gene3D Kinesin motor domain 5 82 IPR036961 -
Dere03g1592 530 Gene3D Kinesin motor domain 83 121 IPR036961 -
Dere03g1592 530 ProSiteProfiles Myosin motor domain profile. 37 530 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere03g1592 530 Gene3D - 345 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1592 Dere-ChrDere03 26432291 26439020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1592 10 517 Myosins gene family AT1G54560 68.804 0.0 793