Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1590 ATGGAGGAAATATCTTCGGCGGTTGCAGTGCCATTTACTCTTGGGAATATGATCCCAAAGGACTCAGCAGTGACGACACACATGGATATTGCTGGGCTAAAGTTCATGGCAAGTACAGCAGCATTGATATTAAACCCTGCAATGGAGAGCCATGAATCTGTTGGAAGTGATAATAAAAATCATACAGATGTTAGTCCACAACATCAAATTACAGTATCTGCAAGGAAAAAGGAGAATCAGGTAGGAGTTTCCCTTGTGTCAGAAATGACTACTGAATGTAACAGTAATCAGATCTCGGCTGAAACCCTTAATCAGGGAAGGAAGGAAGATGAATTCAGGTTAGGGGTTGATTTTCAATGTCAGCATAATTCAAAGTCTCAATCTGTGGCTTGTGACATTAGCGGTATCCTTGGGGATGAATCTTCAACTTTGAGGACCTATAGTTCTGAGACAGATTTACCAATTACTTTGGAGGTTGAAGATAGTATCCATGGTAAGTACAGTTTCAAAGATTCGTATACGGTGCTGGAGCCAGTGCAAAACATGGTTTCTGTTCCAACAGAACTTGAGAGTGAAGATGGCAGTGGGTCAGATGGATCTTATCCAAAACCATTTGCTCCCCCAATTGAGATGCCAGAGGAGAAAAAAATGTGCAGAGCAAGCAGCCAGAATGCTATGGAAATGAGTGGTGGACCCCTTTGGGGCTTTTCATCCATCTGTGGAAGGAGAGAGGAGATGGAAGACGCTATTGCTATAAATCCTCATCTTTTGCAAGTTCCTTCACATATGCTAATGGATGACCATGTGAATGAAAACGCCAAAAACTCGATGGCCCATTTTTTTGCTGTCTATGACGGACATGGGGGCTCTCAGGTTGCTAATTATTGCCGGGAGCGTCTTCATTCAGTGTTTGTTGAGGAGATACAAGCTGCTGACTCAAGTTTGGCTGAAAGTAATTGGCAGGACCATTGGAAGAAAGCATTCTCCTGTTGTTTTCAGAAAGTTGATGACGAGGTTGGAGGAATTCGTGCTGGGAACAAAGGAAGCAATAATGATGGATCTGAATCAAGTATAGAACCACTTGCTCCTGAAACTGTTGGTTCTACTGCAGTAGTTGTCATTATATATCAAACCCACTTAATAGTTGCAAATTGTGGGGATTCAAGAGCAGTATTGTGTCGTGGAAAAGAAGCCGTGCCATTATCTTTTGATCACAAACCAAAAAGAGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGATTATACAGTGGAATGGCTACCGGGTACTTGGAGTCTTGGCAGTGTCACGGTCTATAGGTGATAGGTACTTAAAACCATGGATAATTCCGGTGCCGGAAGTCAAGTTCGTCCGCCGGGAGAAAAGGGACGAGTGCCTAATTCTAGCAAGCGATGGTTTATGGGATGTCATGACAAATGAAGAAGCTTGTGAGATTGCACGAAAACGAATCCTTCTTTGGCACAAGAAGCATGGCAATCCCGGGGCGGCTGGGCCAGGAGAGGGAGTTGATCCTGCAGCTCAGTCTGCTGCAGAGTACTTATCAAAACTTGCCCTCCAAAGGGGAAGCAAAGATAACATCTCTGTTATAGTAATAGACTTGAAGGGTCAAAGAAAATTTAAGACAAGGGCATAA 1659 0.4364 MEEISSAVAVPFTLGNMIPKDSAVTTHMDIAGLKFMASTAALILNPAMESHESVGSDNKNHTDVSPQHQITVSARKKENQVGVSLVSEMTTECNSNQISAETLNQGRKEDEFRLGVDFQCQHNSKSQSVACDISGILGDESSTLRTYSSETDLPITLEVEDSIHGKYSFKDSYTVLEPVQNMVSVPTELESEDGSGSDGSYPKPFAPPIEMPEEKKMCRASSQNAMEMSGGPLWGFSSICGRREEMEDAIAINPHLLQVPSHMLMDDHVNENAKNSMAHFFAVYDGHGGSQVANYCRERLHSVFVEEIQAADSSLAESNWQDHWKKAFSCCFQKVDDEVGGIRAGNKGSNNDGSESSIEPLAPETVGSTAVVVIIYQTHLIVANCGDSRAVLCRGKEAVPLSFDHKPKREDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPVPEVKFVRREKRDECLILASDGLWDVMTNEEACEIARKRILLWHKKHGNPGAAGPGEGVDPAAQSAAEYLSKLALQRGSKDNISVIVIDLKGQRKFKTRA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1590 552 CDD PP2Cc 235 542 IPR001932 -
Dere03g1590 552 SUPERFAMILY PP2C-like 233 544 IPR036457 -
Dere03g1590 552 MobiDBLite consensus disorder prediction 347 361 - -
Dere03g1590 552 Gene3D - 220 552 IPR036457 -
Dere03g1590 552 ProSiteProfiles PPM-type phosphatase domain profile. 233 542 IPR001932 -
Dere03g1590 552 FunFam Protein phosphatase 2C 16 221 552 - -
Dere03g1590 552 MobiDBLite consensus disorder prediction 342 361 - -
Dere03g1590 552 ProSitePatterns PPM-type phosphatase domain signature. 280 288 IPR000222 GO:0043169
Dere03g1590 552 SMART PP2C_4 223 540 IPR001932 -
Dere03g1590 552 PANTHER PROTEIN PHOSPHATASE 211 542 IPR015655 GO:0004722|GO:0006470
Dere03g1590 552 SMART PP2C_SIG_2 264 542 IPR001932 -
Dere03g1590 552 Pfam Protein phosphatase 2C 235 535 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1590 Dere-ChrDere03 26399788 26402268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1590 213 551 PP2C-type Phosphatase Gene Family AT4G26080 59.249 1.19e-138 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1590 03 26399788 26402268 Dere14g1545 14 16884314 16887813 CCT
Dere03g1590 03 26399788 26402268 Dere03g1590 03 26399788 26402268 ECH