Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1572 ATGAAGATTTGGAAGTCTATGTTTCAGAGTTGCTTCAGGGGAGAGTATCCGTCGCCGAGGCCGAAGAAGGTGGTGGCGACGAGGCAGAGTTCGTATCACTGGGTCTCTGTGTCGGATTTGAGCAATCCCAGCGCGTCGCTGTCGGAGGATCTGTCGGTGTCGCTGGTGGGATCGAACCTGTATGTGTTCACGCTGGCTGAGCTGAAGGTCATCACGCAGGGCTTCTCTTCCAGTAACTTCCTCGGAGCAGGTGGGTTCGGACCTGTGCATAAGGGCTTCATCGACGACAAGCTCAGGCCTGGGCTTAAGGCTCAGACCGTCGCTGTTAAGCTCTTGAACTTGGATGGCTCTCAGGGTCACAAAGAGTGGTTGACGGAAGTAGTTTTCCTAGGCCAACTGAGGCATTCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGATGAACACAGGCTTCTGGTGTATGAAAATTTGCCAAGAGGCAGCTTAGAGAATCAACTATTCAGAAGATACTCAGTATCATTACCATGGTCGACGAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCACGAAGCAGAGAAACCTGTTATATTTAGAGATTTCAAAGCTTCAAACATCTTATTAGACTCAGATTACAATGCAAAGCTGTCTGATTTTGGGTTGGCAAAGGATGGCCCAGAAGGAGATGACACCCACGTTTCAACTCGAGTTATGGGTACCCAAGGCTATGCTGCCCCAGAATATGTCATGACAGGTCACTTGACAACAAAGAGTGACGTATACAGCTTTGGGGTGCTGCTTTTGGAGCTACTAACAGGAAGGAGATCAGTGGACAAAGGTCGTCCTCAGAGAGAGCAAAACTTGGTTGAATGGGCGAGGCCTATGTTGAACGACTCAAGAAAGCTAACCAGAATAATGGACCCAAGGCTCGAAGGTCAGTTCTCTGAGATGGGAGCTAGAAAAGCTGCTGCATTGGCTTACCTGTGTCTGAGCCACAGGCCCAAGAACAGACCCTCCATGACCACAGTGGTTAAGACCCTCGAGCCACTCCAGGACTTCGATGACATCCCCATCGCACCTTTCGTCTACACTGTGCCTCCTGAGGACCGTCATGACTCTCTGGAATGTGAAACCCCGAGAGAGAGAAAGAGGGAACATGGTCATCATCATCATCATCACCGTCTCCACCACCACAAGCACCCTCTGAGATCGCCCAGGTCACCACCTAAGTCGACAAGTTCACAGTCGCAGAGTGCTTCAAGTTCAACCAGTGGGTCAAACTCACCTCCTTTACACCACAAGGCTAAGGGAGCTTAA 1332 0.4985 MKIWKSMFQSCFRGEYPSPRPKKVVATRQSSYHWVSVSDLSNPSASLSEDLSVSLVGSNLYVFTLAELKVITQGFSSSNFLGAGGFGPVHKGFIDDKLRPGLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEDEHRLLVYENLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAEKPVIFRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTTKSDVYSFGVLLLELLTGRRSVDKGRPQREQNLVEWARPMLNDSRKLTRIMDPRLEGQFSEMGARKAAALAYLCLSHRPKNRPSMTTVVKTLEPLQDFDDIPIAPFVYTVPPEDRHDSLECETPRERKREHGHHHHHHRLHHHKHPLRSPRSPPKSTSSQSQSASSSTSGSNSPPLHHKAKGA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1572 443 Pfam Protein tyrosine and serine/threonine kinase 79 352 IPR001245 GO:0004672|GO:0006468
Dere03g1572 443 MobiDBLite consensus disorder prediction 389 410 - -
Dere03g1572 443 MobiDBLite consensus disorder prediction 411 435 - -
Dere03g1572 443 Gene3D Phosphorylase Kinase; domain 1 36 156 - -
Dere03g1572 443 PANTHER OS01G0588500 PROTEIN-RELATED 51 356 - -
Dere03g1572 443 FunFam Probable serine/threonine-protein kinase PBL8 158 367 - -
Dere03g1572 443 CDD STKc_IRAK 81 355 - -
Dere03g1572 443 MobiDBLite consensus disorder prediction 373 388 - -
Dere03g1572 443 MobiDBLite consensus disorder prediction 372 443 - -
Dere03g1572 443 ProSiteProfiles Protein kinase domain profile. 75 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1572 443 Gene3D Transferase(Phosphotransferase) domain 1 158 361 - -
Dere03g1572 443 SUPERFAMILY Protein kinase-like (PK-like) 51 353 IPR011009 -
Dere03g1572 443 FunFam Serine/threonine-protein kinase BIK1 42 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1572 Dere-ChrDere03 26164291 26167055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1572 63 373 Glycoside Hydrolase AT3G07070 51.274 1.23e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere03g1572 PK_Tyr_Ser-Thr 9.1e-45 CL0016