Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1571 ATGACTCCAATCAGTTTCTATATGGAGCCTGTGATAGCCATAGCATGTCTTCTTTCTATTTCCTTTGCCATACTTCTCACAAAGATCCTCACCTTCCAAAAGCTTAACCCAAACCTCCCTCCAGGTCCCAAACCATGGCCTATCATAGGTAACCTCAACCTAATCAGCCACCTTCCTCACCAATCCCTTCACAAACTGTCCCAAAAATATGGTCCTCTCATGCACCTCAAGTTCGGGTCCTCCCATGTTGTCGTTGCCTCTTCCAGTGAAATGGCCAAGCAATTCCTCAAAACCCACGACCACGTCTTCGCCTCCAGACCCCAAACTGCTGCTGGCAGATACACCACCTACAACTACTCCAACATCACTTGGGCTCCTTATGTACCATACTGGCGTCAAGGCCGTAAGATTTACCTCTCTGAGTTGTTCAGCTTGAAGAGGCTCGAATCCTTCCATGACATTCGTGTGCAAGAAAGGCATGCCTTTATGTCTCGCTTGCTTGCTCTTTCCGGTAAGCCTACTGCTGTGAAAGACCATCTTTCACGCTTTACTCTCAGTGTTATCAGTAGGATTGTGTTGGGGAAGAAGTACTTCAGTGATGAGTCTAATAAGGTGGAGGATGGGGAGTGTGTGGTGAGGCTCAAGGAGTTTCAGGAGATGCTGGATGAGTTGTTCTTACTTAATGGGGTGTTGAATATAGGGGATTGGATTCCTTGGTTGGGTTTCTTGGACTTGCAAGGGTATGTTAAGCGAATGAAGGCTCTTAAGAAGAGGTTTGATAGGTTCCATGATCATGTGTTTGAAGAGCATAGGGCGAGGAGGAAAACAGAGATCAACTTTGTGCCCAAGGATATGGTGGATTATTTGTTGGAATTGGCTGATGATCCTTCTCTTGATGTTACGTTCACTTATGATCGTGTTAGAGGCTTCACTCAGGACCTAATAGCTGGAGGCACAGATACATCAGCAACAAACGTGGAATGGGCGATGTCAGAACTAATGAAGCATCCGAATCTTATGAAGAAGGCAATGGAAGAGCTAGACAGAGTGATAGGAAGGGAAAGATGGGTACAAGAGAGTGATATCCCTCACCTTCCATACTTAGACGCAATCATTAAAGAAACAATGAGGCTTCACCCAGTGGCTGTACTCCTCGCACCACACTTGGCTCTTCAAGATTGCAAGGTTGGAGGCTACGATATTGAGAAGGGAACCACAGTCTTCATAAATAGTTGGAGCATTGGCAGAGACCCATCGCAGTGGGACAAACCAGAAGAGTTTTGTCCAGAGAGGTTCTTAGGGAAGGGGATTGGTGTGAAGGGACAAAGTTTTGAGTTACTGCCCTTTGGATCTGGGAGAAGGATGTGCCCTGGGTATAACCTTGGGCTGAAGATGATTAGTTGTAGCTTGGCCAACTTGTTGCATGGCTTTACTTGGAGATTGCCTGAGAATCTCAATCCAGAAGACTTGAGCATGGAAGAAGTGTATGGGTTGGCAACTGTGAGGAAATTCCCACTAGTTGCTGTGGTTGAGCCAAGACTCCCTCTCCATCTTTTCAATGATTAG 1566 0.4623 MTPISFYMEPVIAIACLLSISFAILLTKILTFQKLNPNLPPGPKPWPIIGNLNLISHLPHQSLHKLSQKYGPLMHLKFGSSHVVVASSSEMAKQFLKTHDHVFASRPQTAAGRYTTYNYSNITWAPYVPYWRQGRKIYLSELFSLKRLESFHDIRVQERHAFMSRLLALSGKPTAVKDHLSRFTLSVISRIVLGKKYFSDESNKVEDGECVVRLKEFQEMLDELFLLNGVLNIGDWIPWLGFLDLQGYVKRMKALKKRFDRFHDHVFEEHRARRKTEINFVPKDMVDYLLELADDPSLDVTFTYDRVRGFTQDLIAGGTDTSATNVEWAMSELMKHPNLMKKAMEELDRVIGRERWVQESDIPHLPYLDAIIKETMRLHPVAVLLAPHLALQDCKVGGYDIEKGTTVFINSWSIGRDPSQWDKPEEFCPERFLGKGIGVKGQSFELLPFGSGRRMCPGYNLGLKMISCSLANLLHGFTWRLPENLNPEDLSMEEVYGLATVRKFPLVAVVEPRLPLHLFND 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1571 521 Pfam Cytochrome P450 40 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 CDD CYP71_clan 71 506 - -
Dere03g1571 521 SUPERFAMILY Cytochrome P450 40 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Dere03g1571 521 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PANTHER CYTOCHROME P450 98A9 17 520 - -
Dere03g1571 521 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 FunFam Cytochrome P450 84A1 32 514 - -
Dere03g1571 521 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1571 521 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1571 Dere-ChrDere03 26145857 26147557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1571 36 520 Cytochrome P450 AT5G07990 42.566 5.76e-139 409