Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1563 ATGGCCTTTGGAGTTGCGAGAGGGCTAGTCTACTTGCATGAGGATTGTTGCACCCAGATCATCCATTGCGACATAAAGCCACAAAATATACTTCTGGACCAGTACTACAATGCTAGAATCTCAGATTTTGGGTTAGCAAAGCCATTAATGATCAACCAAAGTCGCACTGTCACTGACATTAGAGGAACAAAAGGGAAAAATGTGGATACGAAGACTGGGAGTGAAGAGAAGGCAATTTTAACTGACTGGGCATATGACTGCTACAGAAGTAGAAGACTAGACATTCTGGTTGAAAATGATGATGAGGCTGTGAATGACATGATGAGGCTGGAAAGGTTTGTGATGATAGCCATTTGGTGCATCCAAGAAGATCCCGCTGTGAGGCCTACAATGAAGAAGGTTATGTTGATGCTGGAAGGTTTAGCTCCAGTCACAGTTCCCCCAAGGCCCTGCCCATTTAGCTCTGTTAGTTGCAACTGA 480 0.4437 MAFGVARGLVYLHEDCCTQIIHCDIKPQNILLDQYYNARISDFGLAKPLMINQSRTVTDIRGTKGKNVDTKTGSEEKAILTDWAYDCYRSRRLDILVENDDEAVNDMMRLERFVMIAIWCIQEDPAVRPTMKKVMLMLEGLAPVTVPPRPCPFSSVSCN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1563 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1563 159 Pfam Protein kinase domain 4 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1563 159 SUPERFAMILY Protein kinase-like (PK-like) 2 150 IPR011009 -
Dere03g1563 159 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 66 152 - -
Dere03g1563 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 20 32 IPR008271 GO:0004672|GO:0006468
Dere03g1563 159 Gene3D Transferase(Phosphotransferase) domain 1 67 146 - -
Dere03g1563 159 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Dere03g1563 159 FunFam Os07g0541700 protein 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1563 Dere-ChrDere03 26002320 26002895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1563 1 140 Receptor kinase-like Gene Family AT1G60800 35.465 7.00e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere03g1563 Pkinase 3e-13 CL0016