Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1559 ATGGCCTTTGGGGTTGCGAGAGGGCTAGTCTACTTGCATGAGGATTGTTGCACCCAGATCATCCATTGCGACATAAAGCCACAAAATATACTTCTGGACCAGTACTACAATGCTAGAATCTCAGATTTTGGGTTAGCAAAGCTATTAATGATCAACCAAAGTCGCACTGACACTGGCATTAGAGGAACAAAAGGGAAAAATGTGGATACGGAGACTGGGAGTGAAGAGAAGGCAATTTTAACTGAATGGGCATATGACTGCTACAGAAGTAGAAGACTAGACATTCTGGTTGAAAATGATGATGGGGCTGTGAATGACATGATGAGGCTGGAAAGGTTTGTGATGATAGCCATTTGGTGCCTCCAAGAAGATCCGGCTGTGAGGCCAACAATGAAGAAGGTTATGTTGATGCTGGAAGTGTGGGAGGCACGTATATGGTGGGCAGAAGCAAATTTGGAGCGTCGAATCTTAATGAAGCAGCAGAGATAAACTGAGAAAGACCCATTGGGACATCACGTGGCGTCTGACCCACCAGTCCCCTCAAAGCCAAAGCATTTCATGAGACCACTCCATCATCATGGCTTCCTGGATGAAGAAGCAATTCTTTGTGGAAACCCTTGTCGGCGTTATGCCTCCGAAGAAGAATTCAATCCCCTAAAAATTCCTACTTCGTGCTCTCTAAACAACGAATATGGTCGGGGTTGA 705 0.4539 MAFGVARGLVYLHEDCCTQIIHCDIKPQNILLDQYYNARISDFGLAKLLMINQSRTDTGIRGTKGKNVDTETGSEEKAILTEWAYDCYRSRRLDILVENDDGAVNDMMRLERFVMIAIWCLQEDPAVRPTMKKVMLMLEVWEARIWWAEANLERRILMKQQRXTEKDPLGHHVASDPPVPSKPKHFMRPLHHHGFLDEEAILCGNPCRRYASEEEFNPLKIPTSCSLNNEYGRG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1559 234 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 66 141 - -
Dere03g1559 234 Gene3D Transferase(Phosphotransferase) domain 1 65 146 - -
Dere03g1559 234 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1559 234 Gene3D Transferase(Phosphotransferase) domain 1 1 64 - -
Dere03g1559 234 FunFam Os07g0541700 protein 1 63 - -
Dere03g1559 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 20 32 IPR008271 GO:0004672|GO:0006468
Dere03g1559 234 SUPERFAMILY Protein kinase-like (PK-like) 2 147 IPR011009 -
Dere03g1559 234 Pfam Protein kinase domain 4 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1559 Dere-ChrDere03 25985402 25987777 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1559 1 143 Receptor kinase-like Gene Family AT1G60800 34.807 9.08e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere03g1559 Pkinase 9.5e-13 CL0016