Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1558 ATGGATTTGGAACCAAAAGGAGCTGAGAATTCAAAGATGAAGGGTATTGGAAACCAGAGCAGTAAAGATATGATTTTTAGAGCCGACAAGATTGATCTCAAAAGTTTGGATGCCCAGCTGGAAAAGCACTTAAGCAAAGTCTGGTCGAGGAAATTGGAGCAAGACAGGCCTAAAGAAGAGTGGGAGATTGATTTGTCCAAATTGGATTTACGATATGCTTTTGCTCATGGGGCCTTTGGTACTGTCTACAGGGGTACCTATGATAACCAAGAAGTTGCAGTGAAAGTGTTGGACTGGGGTGAAGATGGTGTCACCACAGCAGCTGAAACTGCTGCTTTACGGGCATCATTCCGGCAGGAGGTTGCTGTCTGGCACAAACTTGACCATCCAAATGTCACAAAATTTATTGGAGCTTCAATGGGAACTTCAAATCTTAAGATTCCGTCAAATAACTCTTCAACTGATGATCAGAATCCTCCTCCATCTAGGGCATGTTGTGTTGTTGTTGAGTATCTTGCTGGTGGGACATTAAAACAATTTTTGATTAAAAATAGGCGGAAGAAACTTGCTTATAAGATTGTGGTCCAGCTGGCCTTGGACCTCTCTAGGGGACTTAGCTATCTACATTCGAAGAGGATCGTACATCGTGATGTCAAAACTGAGAATATGTTGCTAGATGGAGATAGAAATTTGAAAATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTCTGAATCTGAGTGACATGACAGGCGAAACTGGAACCCTTGGATACATGGCACCGGAGGTTCTGGAGGGTAAGCCTTACAACAGAAGATGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCCTATCCGGATCTTAGCTTTGCTGACGTGTCTGCTGCAGTTGTTCGTCAGGACTTACGGCCAGAAATTCCAAGATGTTGTCCAAGCGCTTTTGCAAATATAATGAGGAAATGCTGGGATGGGAATCCAAACAAGCGTCCAGAGATGGAAGAGGTGGTGAGAATGCTGGAAGCAGTTGATACCAGCAAAGGAGGAGGAATGATACCTGAAGATCAAACTCCTAACTGTTTCTGCTTTGCACCTACCCGTGGGCCCTGA 1128 0.4406 MDLEPKGAENSKMKGIGNQSSKDMIFRADKIDLKSLDAQLEKHLSKVWSRKLEQDRPKEEWEIDLSKLDLRYAFAHGAFGTVYRGTYDNQEVAVKVLDWGEDGVTTAAETAALRASFRQEVAVWHKLDHPNVTKFIGASMGTSNLKIPSNNSSTDDQNPPPSRACCVVVEYLAGGTLKQFLIKNRRKKLAYKIVVQLALDLSRGLSYLHSKRIVHRDVKTENMLLDGDRNLKIADFGVARVEALNLSDMTGETGTLGYMAPEVLEGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSAAVVRQDLRPEIPRCCPSAFANIMRKCWDGNPNKRPEMEEVVRMLEAVDTSKGGGMIPEDQTPNCFCFAPTRGP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1558 375 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 349 - -
Dere03g1558 375 SMART serkin_6 68 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1558 375 FunFam Kinase suppressor of Ras 1 57 152 - -
Dere03g1558 375 FunFam Serine/threonine-protein kinase HT1 172 357 - -
Dere03g1558 375 ProSiteProfiles Protein kinase domain profile. 68 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1558 375 PIRSF ILK 33 355 - -
Dere03g1558 375 CDD STKc_MAP3K-like 75 346 - -
Dere03g1558 375 SUPERFAMILY Protein kinase-like (PK-like) 52 346 IPR011009 -
Dere03g1558 375 Pfam Protein tyrosine and serine/threonine kinase 73 346 IPR001245 GO:0004672|GO:0006468
Dere03g1558 375 PRINTS Tyrosine kinase catalytic domain signature 169 182 IPR001245 GO:0004672|GO:0006468
Dere03g1558 375 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Dere03g1558 375 PRINTS Tyrosine kinase catalytic domain signature 317 339 IPR001245 GO:0004672|GO:0006468
Dere03g1558 375 PRINTS Tyrosine kinase catalytic domain signature 207 225 IPR001245 GO:0004672|GO:0006468
Dere03g1558 375 Gene3D Phosphorylase Kinase; domain 1 57 150 - -
Dere03g1558 375 Gene3D Transferase(Phosphotransferase) domain 1 174 358 - -
Dere03g1558 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1558 Dere-ChrDere03 25973201 25980985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1558 17 375 MAP Kinase Kinase Kinase AT3G22750 79.167 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere03g1558 PK_Tyr_Ser-Thr 1.5e-59 CL0016