Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1554 ATGGCTCGGGACGGGAGCGTTGTCCCGGCGGACCCCCAGGCTCTGGTGGTTGTAAAGAAGAAAACGCAGTCGTCCAGAAGTTGGATTCTTTTCGATCCTACGGGCCAGGGTTCCATTCTCGACGTCGATAAGTATGCCATCATGCATCGAGTCCAGATTCACGCTCGTGATCTTCGGATTCTCGATCCTCTACTTTCTTACCCGTCTACGATATTGGGTCGAGAAAAAGCTATTGTTCTTAACTTGGAGCATATCAAAGCGATTATCACTGCTGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTTGTTCCTGTTGTTGAGGAACTTCAAAGGCGATTGCCTCATGTAAGTGACAATAATAACCAACAAGGAGATCGTAAAGAGTATTCTGTTGGTCAGCATGACATTGAAGCAGCTGAAGAAGATGAGTCACCCTTTGAGTTCCGTGCCCTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTCCTTGCTGCACGAACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAGCTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGGGTTCGTAAGCTAAAGAGTGCAATGACAAGGCTGACTGCAAGGGTTCAAAAGGTTAGAGATGAGCTTGAACAATTACTGGATGATGACGATGACATGGCTGACCTATACTTATCAAGAAAGTTAGCTGGCTCATCTTCGCCAGTTAGTGGATCAGGTGCTGCCAATTGGTTTACTGCCTCCCCCACCATTGGATCAAAGATATCCAGAGCAAGTAGAGCAAGTATAGCAACAATCCGTGGTGATGAAAATAATGTGGAGGAGCTTGAAATGTTACTGGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAAATTATCGACGCTTCGGGAGTATATTGATGACACAGAAGATTATATTAATATTCAGCTTGACAACCATCGTAATCAGCTAATCCAGTTAGAGCTCTTTCTGAGTTCAGGAACTGTTTGTCTATCTGTCTATTCTTTGGTGGCTGCGATATTTGGCATGAATATCCCATATACTTGGAATGACAACCATGCCTACATGTTCAAATGGGTAGTTATTGTATCAGGAATATTTTCTGCTATTATGTTTGTCTTAATTATTGCCTACGCTCGTAAGAAGGGTTTGCCAATGGCGATGCAAGGAAGACGCTTGGTTGATGGCATGAAGGATTTTCCATGTCCGGCAGAGAATCTGAATAGTATTGGTGCTGGGAGAAAGCCAGTCTTGGTGAGAAATTCAAAGAAGAACTCTTCGAAGAGCCAGAAGCACCATGATATTGGCAATGCCGTCAAAAGATGCTTCCCAATTCTAACATCTAATAAGATAACCATCCATTTTGATAAGAAAATGTAA 1401 0.4297 MARDGSVVPADPQALVVVKKKTQSSRSWILFDPTGQGSILDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPHVSDNNNQQGDRKEYSVGQHDIEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLAGSSSPVSGSGAANWFTASPTIGSKISRASRASIATIRGDENNVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVAAIFGMNIPYTWNDNHAYMFKWVVIVSGIFSAIMFVLIIAYARKKGLPMAMQGRRLVDGMKDFPCPAENLNSIGAGRKPVLVRNSKKNSSKSQKHHDIGNAVKRCFPILTSNKITIHFDKKM 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1554 466 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 391 IPR039204 -
Dere03g1554 466 Gene3D Magnesium transport protein CorA, transmembrane region 107 324 - -
Dere03g1554 466 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 330 382 IPR045863 -
Dere03g1554 466 Coils Coil 194 221 - -
Dere03g1554 466 CDD Mrs2_Mfm1p-like 28 391 IPR039204 -
Dere03g1554 466 FunFam Magnesium transporter MRS2-1 16 99 - -
Dere03g1554 466 Pfam CorA-like Mg2+ transporter protein 265 382 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Dere03g1554 466 Gene3D - 14 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1554 Dere-ChrDere03 25914105 25922008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1554 1 367 MRS2 Gene Family AT5G64560 81.522 0.0 553