Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1553 ATGGCAGCTCTGCTAGGCAAGGAGCAAGGTTTGAGTTTTAACCTCAAGGAGACTGAGCTTTGTTTGGGGTTGCCCGGCGGCTGCGGCGGCCAGGTGGAAACTCCGAAGGCCACCGGAAAGAGAGGGTTCTCTCAGACTGTAGATCTCAAGCTCAATCTTCAATCCAAAGAAGATCTTAACGAGAACTTGAATAATGTCTCGAAGGAAACGAGCCTCCTCAAGGACCCAGCTAAGCCACCTGCTAAGGCACAAGTAGTGGGGTGGCCACCAGTGCGATCTTACAGGAAGAACATAATGACCCAAAAAGGGAACAGTGAAGAGGATTCAGAGAAGACAAGAAGCAGTGGTGGTGGAGCACTTGTGAAGGTTTGCATGGATGGTGCACCCTACCTTCGAAAGGTGGACTTGAAAATGTACAAAAGCTACCAGCAATTATCTGATGCTCTGGCCAAAATGTTCAGCTCTTTCACCAAGGGTAACTATGGGACCCAAGGAATGATAGACTTCATGAATGAAAGCAAGTTGATGGATCTCTTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAAGATGGCGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTCGTTGACTCATGCAAGCGTCTGCGAATAATAAAAGGATCAGAAGCTATTGGGCTAGCTCCAAGAGCCATGGAAAAACGCCAAAGCAGAAACTAA 711 0.4796 MAALLGKEQGLSFNLKETELCLGLPGGCGGQVETPKATGKRGFSQTVDLKLNLQSKEDLNENLNNVSKETSLLKDPAKPPAKAQVVGWPPVRSYRKNIMTQKGNSEEDSEKTRSSGGGALVKVCMDGAPYLRKVDLKMYKSYQQLSDALAKMFSSFTKGNYGTQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIIKGSEAIGLAPRAMEKRQSRN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1553 236 Coils Coil 49 69 - -
Dere03g1553 236 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 14 223 IPR003311 GO:0005634|GO:0006355
Dere03g1553 236 SUPERFAMILY CAD & PB1 domains 111 215 - -
Dere03g1553 236 Pfam AUX/IAA family 37 227 IPR033389 -
Dere03g1553 236 FunFam Auxin-responsive protein 113 228 - -
Dere03g1553 236 Gene3D - 113 229 - -
Dere03g1553 236 ProSiteProfiles PB1 domain profile. 118 223 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1553 Dere-ChrDere03 25889690 25891857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1553 105 226 B3 DNA Binding Superfamily AT4G23980 30.328 3.84e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dere03g1553 AUX_IAA 7e-81 CL0072