Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1529 ATGGCAGTAGATCTGGTAGGCCTTCCGAGGATGGAAGAGCAGATGGCTATACAGGAAGCTGCTTCTGCTGGCTTGAAGAGCATGGAGCGTCTTATTCGTATTATTAATTCCTCTCAATCTTCTGATAATTCTCGCCGCCTTCATCACCTGGATTGTGCTCAAGCCACCGACTTCACCGTTTCCAAGTTCAAGCAAGTCATCAACTTACTCAATCGAACCGGCCATGCCCGCTTTCGTCGCTCGCCTTCCCATCCTAATCCTTCTTCTTCTACTTCTCCTTCTCCTTCTGCTCTTCCTAATCTATCCCAATCGAAGCAGCTTGATCTGAACCCGGTTCAGTCCTATCACTCTCAGGGATTGACCCTTGATTTTGCGAAGCCCAGTAAGGCCAAGACGGGTCTTCTCAACCCTTCTACTGAGTTGTCTGTGTCTCAGTACTCCAAGGACACCTTTAGTATCTCCCCTCCCATATCTACTACTAGCTCCTCTTTTATGTCTTCTATCACCGGAGACGGCAGCGTTTCCGACGGGAAAATAGGGCCATCGCTGCTTCCTCCGCCCGCGCCCGCCGTCTCCGCTGGTAAACCACCTCTCTCCTCGTCTCACAAGAAAAGGTGCCACGATGCTGCCTTCTCTGAGAAAATTTCATCCTCTGGCCACTGCCATTGCTCCAAGAGAAGGAAATCGCGAGTTAAAAAGACGATCCGAGTTCCCGCTATAAGCTTGAAGATCGCCGATATTCCGCCGGACGAGTATTCTTGGAGGAAGTACGGGCAGAAGCCAATCAAGGGTTCACCCTACCCTCGTGGATATTATAAGTGCAGTACAGTGAGAGGGTGCCCAGCGAGGAAGCACGTAGAGCGAGCGCAAGATGACCCGAAGATGCTGATCGTGACGTATGAGGGTGAGCACCGTCACCAGCCGGACGCGCGTGCGGCGGAATCCGGCGGTGCCGGCATCGGTCTCAGCCTTCAGACCAGTTAG 984 0.5254 MAVDLVGLPRMEEQMAIQEAASAGLKSMERLIRIINSSQSSDNSRRLHHLDCAQATDFTVSKFKQVINLLNRTGHARFRRSPSHPNPSSSTSPSPSALPNLSQSKQLDLNPVQSYHSQGLTLDFAKPSKAKTGLLNPSTELSVSQYSKDTFSISPPISTTSSSFMSSITGDGSVSDGKIGPSLLPPPAPAVSAGKPPLSSSHKKRCHDAAFSEKISSSGHCHCSKRRKSRVKKTIRVPAISLKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHQPDARAAESGGAGIGLSLQTS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1529 327 SMART WRKY_cls 248 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1529 327 FunFam WRKY transcription factor 65 232 309 - -
Dere03g1529 327 Pfam Plant zinc cluster domain 203 246 IPR018872 -
Dere03g1529 327 SUPERFAMILY WRKY DNA-binding domain 246 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g1529 327 MobiDBLite consensus disorder prediction 74 102 - -
Dere03g1529 327 Gene3D WRKY domain 239 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g1529 327 ProSiteProfiles WRKY domain profile. 243 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1529 327 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 312 IPR044810 GO:0003700
Dere03g1529 327 Pfam WRKY DNA -binding domain 250 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1529 327 MobiDBLite consensus disorder prediction 82 102 - -
Dere03g1529 327 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1529 Dere-ChrDere03 25245338 25246559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1529 1 307 WRKY Transcription Factor Family AT2G24570 53.916 2.87e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere03g1529 WRKY 3.7e-26 CL0274