Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1525 ATGGGAAACTGTTTGTGTCGTCAATCAGATCCTCCAAGTGGATATCCCAACTCCAACACTGAGGGCAACAATAACCAACTGGGGAGCAGCCAGTTACTCACTGGACGTAGTAATTCGAGATTATTGCACAGTACAAGCAGTTCTACTGGGTTGGGACGCAGCAGCCTCTCTGCAGGACATAGCCGGCTATTTGGGCCAAATAGCAGTAATACATACACAACCAGCAATGCTAGTACCTCTTTCTTAGGCTCTAATATCAGCCAAACCTCTCAAGCAAGAGGCGAAGAGGAATTTCCTAATGGGCAGATCTTGAATGCGGCAAACTTGAAAGTTTTCACTTTTCTAGAACTGAAGGCAGCAACTCAAAATTTTAGAGCTAAAACGGTGTTAGGAACGGGAGGCTTTGGCACAGTGTACAAGGGTTGGCTTAAAGAGGGAGCATCTTCATATAGTAATAGAAATGGGGAATTGGTTATCGCCATCAAGAGATTGAATCCTGATAGCTTTCAAGGATATGCAGAATGGCAGAGAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCTAATCTTGTAAAGTTGATTGGATTTGGAAGGGAAAATGAGGAGCTATTCCTGGTGTATGAATACTTGCACAAGGGCAGCTTGGCTAACCATCTATTCGGAAGAGGTTCAAATGTACGGCCACTTTCATGGGACACAAGGTTAAAGATTATGATTGGAGCAGCTAGGGGCCTAGCTTTCTTACACTCACTGGAAAATAAAATCATATACAGAGATTTTAAGCCAACCAATATCCTACTCAACAAGTTCTACACTCCCAAGTTATCAGACTTTGGTTTGGCCAAAGCTGGTCCTTCAGATGGTGAAAGTCATGTGTCAACAAGGGTTATGGGAACTCACGGTTATGCTGCACCTGAGTACGTGGCCACGGGGCACCTGACTGTGAAAAGTGACGTGTACGGATTTGGAATTGTTTTGGTGGAGATACTCACTGGCAAAGGGATTAATGATATACTAAAGCATGTCTCCCCGGACCAATCAATCATTGATTGGATCAAATCAAATCTATTGAGTAGAAGGAAGATGAGGGACACAATGGACAGCCGATTGGGGGGGAAATATCCACCCAAGTTAGCTTTCGAAGTAGCTCAACTTGCTCTTAAATGTGTCCGAATGGAATATAAACTCAGACCACCAATGACGGAAGTTGTTGAAACATTGGAACAAGTAGAAGCAGCAAATGACAAAACAGTTGATAACAGTAACCGTGCTACTCAATCTGGGGCAGCTCAACTTCAGGGCCGGCCTGTTGGAGGATAA 1320 0.4394 MGNCLCRQSDPPSGYPNSNTEGNNNQLGSSQLLTGRSNSRLLHSTSSSTGLGRSSLSAGHSRLFGPNSSNTYTTSNASTSFLGSNISQTSQARGEEEFPNGQILNAANLKVFTFLELKAATQNFRAKTVLGTGGFGTVYKGWLKEGASSYSNRNGELVIAIKRLNPDSFQGYAEWQREVNFLGRLSHPNLVKLIGFGRENEELFLVYEYLHKGSLANHLFGRGSNVRPLSWDTRLKIMIGAARGLAFLHSLENKIIYRDFKPTNILLNKFYTPKLSDFGLAKAGPSDGESHVSTRVMGTHGYAAPEYVATGHLTVKSDVYGFGIVLVEILTGKGINDILKHVSPDQSIIDWIKSNLLSRRKMRDTMDSRLGGKYPPKLAFEVAQLALKCVRMEYKLRPPMTEVVETLEQVEAANDKTVDNSNRATQSGAAQLQGRPVGG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1525 439 PANTHER OS01G0588500 PROTEIN-RELATED 74 411 - -
Dere03g1525 439 Pfam Protein kinase domain 126 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1525 439 ProSiteProfiles Protein kinase domain profile. 124 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1525 439 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Dere03g1525 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Dere03g1525 439 Gene3D Transferase(Phosphotransferase) domain 1 210 433 - -
Dere03g1525 439 SUPERFAMILY Protein kinase-like (PK-like) 109 408 IPR011009 -
Dere03g1525 439 MobiDBLite consensus disorder prediction 414 439 - -
Dere03g1525 439 MobiDBLite consensus disorder prediction 1 31 - -
Dere03g1525 439 MobiDBLite consensus disorder prediction 414 432 - -
Dere03g1525 439 Gene3D Phosphorylase Kinase; domain 1 95 209 - -
Dere03g1525 439 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 210 421 - -
Dere03g1525 439 MobiDBLite consensus disorder prediction 10 31 - -
Dere03g1525 439 FunFam Serine/threonine-protein kinase BIK1 90 209 - -
Dere03g1525 439 CDD STKc_IRAK 130 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1525 Dere-ChrDere03 25178036 25181929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1525 101 424 Receptor kinase-like Gene Family AT4G02010 42.727 4.13e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere03g1525 Pkinase 2e-42 CL0016