Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1517 ATGTTAAGTTTTGTGACTGCAGTGGAACCTCCTTCATATTCTAAAGTTATTCAGATGCCCTTACCCCAGCGCAATGCCGGAGGATATTTCTTTTTTCTGGGAGGGATTGCAGTGCTCATCATAGTGCTGATTGTTGTGTTAGTGTTTCGGAAGCGTAGTAAAGCAGTCTTACTGTCGAAAACAAAAGCACCAATAAGAACTCACCAAGAGGTGATGAAGATAATAGCTCCTACAAAGCAGCAAGGGTCCATGGAGTTGTTTAGTGGCAGCATTCGAGAAATGAGCTATTTTGACTTCCAGACACTGAGAAAGGCAACAAAGAATTTTCATCCTGATAATCTTCTTGGAAGCGGTGGATTTGGGCCTGTCTATTGGGGAAAGTTGGCAGGTGGAAGGCTAATTGCAGTTAAGACATTGTCTCTTAACAAATCACAGCAAGGAGAAAGAGAATTTCTTACAGAGGTGAGTCTGATCACAAGTATCCAACACAAAAATCTGGTCCGCCTCCTCGGATGCTGCAATGACGGTCCTCAAAGGATACTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCATAATAAATGGAAGCAATGATCAGTTTCTGAATTGGAGCACTAGGTTCCAAATCATTCTTGGAATAGCACGGGCATTGCAATACCTACATGAGGATTCACACTTACGAATTGTTCACAGAGATATCAAAGCAAGCAATATTCTTCTTGATGACAAGTTTCAGCCGAAAATTGGAGACTTTGGACTAGCTAGGTTCTTCCCTGAAGACCAAGTTTACCTCAGTACTCAGTTTGCTGGAACATTAGGTTATACAGCACCTGAATATGCCACTAGAGGAGAACTGTCAGAGAAGGCAGACATATACAGTTTTGGAGTTCTATTGCTTGAAATTATCAGCTGCAGAAAAAACACAGATCTCACTTTACCATCTGAAATGCAGTACCTTCCTGAATACGCATGGAAGCTTTACCAGAATTCAACGTTGATAGATCTGGTAGATCCAAAATTGCGAGCACACGGGTTAGAAGAAAAGGATGTAATGCAAGCAATTCACGTGGCCTTGTTATGTCTTCAGCCTCATGCAAATTTGAGGCCTCCTATGTCAGAGATTGTAGCATTGTTGATCTTCAAAATTGAAATGGTTACAACACCAATGAGACCAGCATTCCTTAGTCGAAGGCGTAAGAAAGATGATGAGAACCATTCTTGGGAAGACATATCTGAGGCTTTCTCCCCAACGCCCAGTGATTTTTCGTCCCTGCCCAAACCACCAAACTAA 1296 0.419 MLSFVTAVEPPSYSKVIQMPLPQRNAGGYFFFLGGIAVLIIVLIVVLVFRKRSKAVLLSKTKAPIRTHQEVMKIIAPTKQQGSMELFSGSIREMSYFDFQTLRKATKNFHPDNLLGSGGFGPVYWGKLAGGRLIAVKTLSLNKSQQGEREFLTEVSLITSIQHKNLVRLLGCCNDGPQRILVYEYMKNRSLDLIINGSNDQFLNWSTRFQIILGIARALQYLHEDSHLRIVHRDIKASNILLDDKFQPKIGDFGLARFFPEDQVYLSTQFAGTLGYTAPEYATRGELSEKADIYSFGVLLLEIISCRKNTDLTLPSEMQYLPEYAWKLYQNSTLIDLVDPKLRAHGLEEKDVMQAIHVALLCLQPHANLRPPMSEIVALLIFKIEMVTTPMRPAFLSRRRKKDDENHSWEDISEAFSPTPSDFSSLPKPPN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1517 431 CDD STKc_IRAK 115 380 - -
Dere03g1517 431 Pfam Protein tyrosine and serine/threonine kinase 113 379 IPR001245 GO:0004672|GO:0006468
Dere03g1517 431 Gene3D Phosphorylase Kinase; domain 1 69 185 - -
Dere03g1517 431 Gene3D Transferase(Phosphotransferase) domain 1 186 388 - -
Dere03g1517 431 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 186 390 - -
Dere03g1517 431 MobiDBLite consensus disorder prediction 398 431 - -
Dere03g1517 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Dere03g1517 431 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 407 - -
Dere03g1517 431 SMART serkin_6 109 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1517 431 FunFam Cysteine-rich receptor-like protein kinase 10 73 185 - -
Dere03g1517 431 ProSiteProfiles Protein kinase domain profile. 109 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1517 431 SUPERFAMILY Protein kinase-like (PK-like) 87 383 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1517 Dere-ChrDere03 25091278 25094167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1517 35 411 Receptor kinase-like Gene Family AT1G56120 42.216 1.85e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere03g1517 PK_Tyr_Ser-Thr 1.4e-46 CL0016