Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1489 ATGGCTGAGGAGGGAAAGAAGGAGGGAGAAGAGAGGAAGATGAAGAAGAGCTACTTCGACGTGATGGGACTGTGCTGTTCGTCGGAGGTGCCTCTGATAGAGAACATCCTGAAACCTCTGGATGGAATCAAAGAGGTTTCTGTCATCGTACCTTCACGAACCGTCATTGTTGTCCACGACACTCTTGTCATTTCCCAGCTTCAAATCGTGAAAGCTCTGAACCAGGCGAGGTTGGAAGCAAACGTAAGGGCATATGGAGAAGACGAGAAGAAGCAGAAGAAGAAATGGCCAAGCCCTTATGCGGTTGCCTCTGGCGTCTTTCTCTTGCTGTCGTTTTTGAAGTATGCGTACGCTCCTCTTCATTATCTGGCTCTCGGTGCTGTAGCCGCTGGAGCTTTTCCTATGATTCTCAAAGTCATAGCCTCTGTCAGCAACCATAGGCTTGACATTAACATTCTGATGATTATTGCTGTTGTGGGCACAGTTGCTTTGAAAGATTTTATGGAGGCTGGGACTATTGTTTTCCTCTTCTCAATCGCTGAATGGCTAGAGTCAAGGGCAAGCCATAAGGCAAGTGCAGCGATGTCGTCGTTGATGAACATTGCCCCTCAGAAAGCAATCATAGCCGAAACTGGAGAGGTTGTGGACGCCGACGAGGTGAAAGTGAACACCATCTTAGCCGTTAAAGCTGGGGAAGTGATACCCATTGATGGAATTGTTGTAGATGGAACCTGTGAAGTGGATGAGAAAACATTGACCGGCGAGTCATTCCCGGTGCCCAAACAAAAAGACTCTACTGTGTGGGCCGGTACCATCAATCTAAACGGTTACGTTAGTGTGAAAACTACTGCACTAGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTAGTGGAAGAAGCTCAAAACAGCAAAACCAGAACCCAGAGATTGATAGACAAGTTTGCCAAGTTTTATACCCCAGCTGTTATGATCATATCAGGTCTTTTAGCGGCGATTCCACTTTTGTTAAGAGTACATAATGTGAAACATTGGTTTCACTTGGCACTGGTTGTTTTAGTAAGTGCATGTCCATGTGCACTTATCCTTTCTACGCCAGTTGTGACTTTCTGTGCATATACAAAAGCAGCTACATTCGGTCTTCTCATCAAAGGGGGTGATTATCTTGAAACCCTTGCAAAAATTAAGGCTATGGCTTTTGATAAAACGGGCACTATTACAAAGGGTGAATTTGTGGTGACAAATTTCCAATCTCTTTGTGATGACGTAGATTTGAACACATTGCTTTACTGGGTCTCAAGCATCGAAAGTAAGTCAAGCCATCCACTGGCAGCAGCAATTGTTGACTATGGAAAGTCACTTTCTATTGATCCTAAGCCAGAAGAGGTGAGAGACTATGAAAATTTTCCTGGGGAAGGCATTCGTGGAAAAATTGATGAGAGAGATATTTACATTGGAAATAGAAAAGTTGCCACAAGAGCCGGGTCTGAAACAGTTCCTACCTTACAAGGTGACTCTCAAGGAGGGAAAACTATTGGCTATATTTTCTCTGGAGCAACTCCAATTGGATTGTTCTCTCTTTCAGATGCTTGCCGATCTGGGGTTGAAGAGGCAATAGGACAGCTAAAATTATTGGGCATCAGAACCTCAATGCTTACGGGAGATAGTCAAGCAGCTGCCATTCAAGCACAAGAACAGCTAGGAAATGCTTTCGAGCTAGTCCATGCCGAACTTTTACCTGAAGGAAAGGTACAAATCATCACAGAATTCAAAAGAGAAGGACGAACAGCCATGGTCGGAGATGGTCTGAATGATGCACCAGCATTAGCTACAGCTGATATTGGTATCTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAGACTGGAAATATAATTCTCATGTCTAATGACATTCGGAAGATACCACAAGCCATCAAACTTGCTAGAAAATCTCATCAGAAAGTCATAGAAAATGTTATATTGTCAGTTGGGACTAAGGCTGCAATTCTTGGCTTGGCCTTTGCTGGTCATCCACTTGTTTGGGCGGCAGTTCTTGCCGATGTTGGAACTTGCTTGTTGGTCATCTTAAACAGCATGCTTCTTCTGCAAAGAGGAGACAAGCATAGAGGAAAGTGTTGTAGATCTTCAGCTCAACGGCACATCCATAGAAGTGGATGTGATGCCCATAAGGACAAGTCTCATCATCACCATCACCACCACCATCGTCGTCATCATCAACATCAGCATGGTACTCATCAGCATTCCAAAATCATGGAAAGTCATGACCAATGCAAAGCCACTGATAAATTCAATGAAAAGCATAGAAGAAAATGTTGTAGATCTTCTGCTCAACTGCACATCCATAGAAGTGGATGTGATGCCAAGAATGGCAAGTCTTCTCACCACCACCATCACCACCACCACCACCATCACCATCAACAACATCAGCATGACACATATCGGCATTCCAAAATCACAGAAAGTCATGGCCAATGTAAAACCATTGATGAATTCCGTGAACCAAAGCAATGTCATCATGGAAGATGTGAGAAGATTAGTGTCCAGTTACATGATACAGAAAGAAAGAGTTGTTCTGGCCATCGGTGCATGATTCTGACTGGAGCTGGTAACTGTGCAAGTGAAATAGACAGTCGCAGTAGCTCTTTGGAACACAATAACTTCCAAGGGACATTACATTCCCACAACCGAAATTGTGACACAATTACTCATGATGGAGCGTCACTTGGTTCTCCCTTCAGTTTCAAGCGCTCTGCTCAGGACGAAAGGCAAATATATAGTAATAAGCATTGCCATGGTGAAAATCCTAAAGATCATAAACTCAGAAAGACATTAGGATGCGATCATGAAATTGAGCATCAAAATCCAGGACTGCAATCTGATTTTAAGATGTGTAGGGAAGATCACATTTCTATTGACATAGACAATAAGCATGCTGAATCGTCCTCAATGTGTGCCTGTGAGAGTTCTGAAGAGAAAGAAAAAGGATCTTGTTGCAAAGGCTGTCCTGACAACTGCAAGGAATTTCCTGCTGTGTGTGCCCCTGTGACTTCCAATGAGAGAGAAATTGATGCATGTTGTGAGGGCTCTTCAAATGAATCCATTGACATAGACAATACGCATGCTGAGTCATCCTCAATGCATACCTGCGGGTGTTCTGAAGAGAAAGAAAAAGGTTCTTGTTGCAAAGGCTGTCCAGACAACTGCAAGGAATTTCCTGCTGTGTGTGCCCCTGTGACTTCAAATGAGCAAGAAGTTGTTGCATGTTGTGAGGCTTCTTCAAAAGAATCCACTGCATTTTCAAGTGCGCATGCTTGTCTTAGTTTGGACAAGAGAGAGCTTGGTGGGTGTTGCAGGAGCTACATCAAGGAATGTTGTGGTAAGCATGGACCTTTAGGGGCTGGTTTTAGAGCAGGTTTATCTGAAATTATTACTGAACAGGTGTAG 3468 0.4377 MAEEGKKEGEERKMKKSYFDVMGLCCSSEVPLIENILKPLDGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALNQARLEANVRAYGEDEKKQKKKWPSPYAVASGVFLLLSFLKYAYAPLHYLALGAVAAGAFPMILKVIASVSNHRLDINILMIIAVVGTVALKDFMEAGTIVFLFSIAEWLESRASHKASAAMSSLMNIAPQKAIIAETGEVVDADEVKVNTILAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNSKTRTQRLIDKFAKFYTPAVMIISGLLAAIPLLLRVHNVKHWFHLALVVLVSACPCALILSTPVVTFCAYTKAATFGLLIKGGDYLETLAKIKAMAFDKTGTITKGEFVVTNFQSLCDDVDLNTLLYWVSSIESKSSHPLAAAIVDYGKSLSIDPKPEEVRDYENFPGEGIRGKIDERDIYIGNRKVATRAGSETVPTLQGDSQGGKTIGYIFSGATPIGLFSLSDACRSGVEEAIGQLKLLGIRTSMLTGDSQAAAIQAQEQLGNAFELVHAELLPEGKVQIITEFKREGRTAMVGDGLNDAPALATADIGISMGISGSALASETGNIILMSNDIRKIPQAIKLARKSHQKVIENVILSVGTKAAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLQRGDKHRGKCCRSSAQRHIHRSGCDAHKDKSHHHHHHHHRRHHQHQHGTHQHSKIMESHDQCKATDKFNEKHRRKCCRSSAQLHIHRSGCDAKNGKSSHHHHHHHHHHHHQQHQHDTYRHSKITESHGQCKTIDEFREPKQCHHGRCEKISVQLHDTERKSCSGHRCMILTGAGNCASEIDSRSSSLEHNNFQGTLHSHNRNCDTITHDGASLGSPFSFKRSAQDERQIYSNKHCHGENPKDHKLRKTLGCDHEIEHQNPGLQSDFKMCREDHISIDIDNKHAESSSMCACESSEEKEKGSCCKGCPDNCKEFPAVCAPVTSNEREIDACCEGSSNESIDIDNTHAESSSMHTCGCSEEKEKGSCCKGCPDNCKEFPAVCAPVTSNEQEVVACCEASSKESTAFSSAHACLSLDKRELGGCCRSYIKECCGKHGPLGAGFRAGLSEIITEQV 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1489 1155 ProSiteProfiles Heavy-metal-associated domain profile. 15 81 IPR006121 GO:0046872
Dere03g1489 1155 SFLD C1.7: P-type atpase like 382 651 - -
Dere03g1489 1155 NCBIfam HAD-IC family P-type ATPase 173 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere03g1489 1155 SUPERFAMILY Calcium ATPase, transduction domain A 213 298 IPR008250 -
Dere03g1489 1155 SUPERFAMILY HAD-like 399 700 IPR036412 -
Dere03g1489 1155 MobiDBLite consensus disorder prediction 799 819 - -
Dere03g1489 1155 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Dere03g1489 1155 MobiDBLite consensus disorder prediction 792 829 - -
Dere03g1489 1155 FunFam Putative cadmium/zinc-transporting ATPase 3 410 531 - -
Dere03g1489 1155 ProSitePatterns Hypothetical cof family signature 2. 599 621 - -
Dere03g1489 1155 SFLD p-type atpase 382 651 IPR044492 -
Dere03g1489 1155 Gene3D - 11 84 - -
Dere03g1489 1155 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere03g1489 1155 PRINTS H+-transporting ATPase (proton pump) signature 599 615 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere03g1489 1155 FunFam Copper-transporting ATPase 1, putative 188 302 - -
Dere03g1489 1155 Pfam E1-E2 ATPase 209 377 - -
Dere03g1489 1155 FunFam Putative cadmium/zinc-transporting ATPase 3 11 84 - -
Dere03g1489 1155 SUPERFAMILY HMA, heavy metal-associated domain 13 83 IPR036163 GO:0046872
Dere03g1489 1155 Pfam haloacid dehalogenase-like hydrolase 395 613 - -
Dere03g1489 1155 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 393 IPR023298 -
Dere03g1489 1155 MobiDBLite consensus disorder prediction 730 752 - -
Dere03g1489 1155 NCBIfam heavy metal translocating P-type ATPase 150 702 IPR027256 GO:0006812|GO:0016020|GO:0019829
Dere03g1489 1155 CDD P-type_ATPase_HM 101 701 - -
Dere03g1489 1155 NCBIfam cadmium family heavy metal-translocating P-type ATPase 150 491 - -
Dere03g1489 1155 Gene3D - 390 650 IPR023214 -
Dere03g1489 1155 MobiDBLite consensus disorder prediction 724 765 - -
Dere03g1489 1155 Gene3D - 410 531 IPR023299 GO:0000166
Dere03g1489 1155 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Dere03g1489 1155 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Dere03g1489 1155 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Dere03g1489 1155 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Dere03g1489 1155 PRINTS P-type cation-transporting ATPase superfamily signature 523 534 - -
Dere03g1489 1155 PRINTS P-type cation-transporting ATPase superfamily signature 545 555 - -
Dere03g1489 1155 Gene3D - 187 302 - -
Dere03g1489 1155 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 11 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1489 Dere-ChrDere03 24630770 24640686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1489 12 815 Primary Pumps ATPases AT4G30110 63.780 0.0 1061