Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1485 ATGTTCGGCAAAGTCTAAGACAAGCCCACCAGAGACAAAGCAAACATGGTAGTTGTAACATTCAAAGGCTGCTACACCGTGAAGCCCTCTGAACCAACGTGGACTGGAACCATGGCTTTATCAGAATGGGATCAAATAGGATACTTGACTCATATACCCACCATCTACTTCTACGACCGACCCTCACACACGGCCATTGCTGACACCTTGAAACGCTCATTAGGCCAAGCCTTGGTGCCGTTTTACCCCATGGCTGGTCGTTTGGAGTGGATAGGCAATGGTCGTCTTCAGCTTCAGTGCAATGCGAAGGGGGCTCAGTTCGTTGAAGCTGAGTGTGAATCGAGTTTGAAGGATCTTGGTGACTTAACTTCCTCTCCAGAACATAGTAGCCTCTTCCCAAATGTAGACTACAGCCTACCACTCAATGAGCTGCCTCTGATTCTGGTTCAGCTCACGACGTTCAAGTGCGGTGGCATCAGTATCGGCATAGCTATTTCACACGCAGTCGTGGATGGACCAGCTGCCCTCCAATTTATATCGGGATGGACTAAGCTTGCAAGAGGAGAGCCCCTACAGACCAAACCATTTCTTTACCGCACCGTGCTACGAGCCGGGGAGCCACCGTTGGCATCACCGCCGCCGACCCTAGATGACCACCCGGAGTTCAGAAGTCCTGCATTATTACTTGGTCAGTCGGATAACTTAGAGGAAAGAAAAAAGAAAACCAAAATGGCCATGCTGAGGCTAACGAAAGATCAAGTCGAAAAGTTGAGGAAGATGGCTAATGAGAGTTGGGCTTGGGAAAAGCCCATGGGCCGTGGATTCACTCGGTACGAGGCAATCAGTGGACACATATGGCGAAGCACATGCAAGGCAAGGGGGCACAAAAACGAGCAACCAACAGCCTTAGGTATCTGTATAGACTCAAGGAGTCGCATGAAGCCTGCACTACCGAAAGAGTACTTAGGCACTGCAACTTTTGACGTGATTGCTAATAGTCTGGCGGGTGAAATAATGTCGAAGCCATTAGGGTATGCTTCGAGCAAAATAAGGGAAGCCATAGAGAAGGTGACAGACGAGTACGTGAGGTCAGGGATAGAGTTCTTGAAGAACCAAAAGGATATAACAGGGTTTCAAGATATTCATGCACTGTTGGACGAGAAGAAAGGGTCTTTCTACGGAAACCCGAATCTTGGAGTAGTGAGTTGGCTGACTCTGCCAATCTACGAGCTTGATTTTGGGTGGGGATCTGAGATATACATGGGACCAGGACCACATGGGCTAGATGGAAGTTCTTTGCTTCTTCCCAGTCATGATGGTGATGGTTCTATTGTGGTTGCATTGTGCTTCCAGGTGGCTCATATGGATGCGTTCCAGAAGCATTTTTATGAAGATATGATGTGA 1404 0.4843 MFGKVXDKPTRDKANMVVVTFKGCYTVKPSEPTWTGTMALSEWDQIGYLTHIPTIYFYDRPSHTAIADTLKRSLGQALVPFYPMAGRLEWIGNGRLQLQCNAKGAQFVEAECESSLKDLGDLTSSPEHSSLFPNVDYSLPLNELPLILVQLTTFKCGGISIGIAISHAVVDGPAALQFISGWTKLARGEPLQTKPFLYRTVLRAGEPPLASPPPTLDDHPEFRSPALLLGQSDNLEERKKKTKMAMLRLTKDQVEKLRKMANESWAWEKPMGRGFTRYEAISGHIWRSTCKARGHKNEQPTALGICIDSRSRMKPALPKEYLGTATFDVIANSLAGEIMSKPLGYASSKIREAIEKVTDEYVRSGIEFLKNQKDITGFQDIHALLDEKKGSFYGNPNLGVVSWLTLPIYELDFGWGSEIYMGPGPHGLDGSSLLLPSHDGDGSIVVALCFQVAHMDAFQKHFYEDMM 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1485 467 Gene3D - 231 465 IPR023213 -
Dere03g1485 467 Gene3D - 17 223 IPR023213 -
Dere03g1485 467 FunFam Tryptamine hydroxycinnamoyl transferase 230 463 - -
Dere03g1485 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 462 - -
Dere03g1485 467 Pfam Transferase family 19 464 - -
Dere03g1485 467 Coils Coil 232 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1485 Dere-ChrDere03 24554673 24556895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1485 19 464 Monolignol Biosynthesis Gene Families AT5G48930 35.938 8.24e-101 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1485 03 24554673 24556895 Dere03g1485 03 24554673 24556895 ECH