Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1464 ATGGACCTTCTGGAAATAGGGTTCAATGAGAAGAAGGACGAAATGACTACTATTAAGCTCGTAAGGTTGGAGCTACGAGACAGATTGCGTGAATTACGAGCTTCCGGCAGCAACGATACTCGAGGAAAGACTTATCGGTTGAGAACTTTAATTGTAGAAGTCAACGCTGTGTTATTTGCTGTTTGCGTGCATGATTTCACTTCCTTGTCTCTACTGCGTTTTGACTTCTGTTTTGCTTCCAAAGCTATTGGTGTTGTTCGTTGTTATTGTTCTCCCTTTCCGGGAATACACAGACCAAAAATGGTTGAAAATTTGAAGAAAAGCAACTTTGAAGTGCTGGGAATGTGCTGTAACTCGGAGGTGGCTCTGATTGAAAGGATTCTGAAGCGTCTCCATGGAGTGCAGCAGATTTCAGTGATGTTCCCTACCAAAACAGTCACTGTAGTCCATGACATTCATCTAATTTCTGAGACACAAATCGCTGATGCGCTGAATACGGCAAGGCTTGAAGCTAGTTTGAGACCAGAAGGAGAGACTAAGTATGAAAAGAAACGGCCAGCCTTAACTACTTTGTTATGTGGCTTGTTACTGGCACTTTCTTTCTTGAAGTATGTTTATCAACCTTTGGGATGGTTGGCTCTCGTTGCTGTTGTCATTGGCTTCCCTAGAGTGCTATTCAGAGGCATAGCTTCCATCAGGAATCTTACTCTTGACATCAACATTCTGGTTCTATTGGCAGTATGTGGTACTATTGCTTTGCAAGATTACTGGGAGGGTGGAATTGTCATCTTCCTATTCTCCACTGTTCAATGGCTCGAGACAAGAGCAAGTTCCCAGGCTATGGTCACCATGTCCTCTTTAACAAACATGGTTCCTCAAAAGGCCATTATTGCTGAGACAGGCCAACATGTTGACGTCAATGCAGTTAAGATCAACACCATCCTTGCAGTCAAGGCTGGTGATGTTATTCCTCTTGATGGTCTCGTTGTTGAAGGAAAATGCGAGGTTGATGAAAAAATGTTGACGGGAGAATCATTCCCTGTCACCAAAGAGTTGGGTTCAACTGTCTGGGCTGGCACTATCAATCTAAATGGTTATATTAGTGTGAAAACTACTGCATTGGCAAATGACACAGCAGTGGCAAGAATGACAAAGCTTGTTGAAGAGGCTCATGGCAGAAAATCGAGAACCCAGAGATTCATAGATACCTGTGCAAAGTACTATTTACCTGTGGTTGTATTGATTTCAGCTGGCATTGCTGTGATTCCCATTGCATTAAGAGTTCCTAACATAAATTATTGGTGTCGCATGGCAATTGTGGTTTTAGTAAGTGCATGCCCCTGTGCTCTTATCCTCTCTACACCTGTTGCTATCTTCTGTGCCCTTACAAAAGCTGCCACAAGTGGGTTGCTACTGAAAGGTGGAGATTATGTTGAAACACTTGCTGGGATTGAGACTGTGGCTTTTGATAAAACGGGCACAATAACAAAAGGGGAGTTCACTGTGACAGATTTTTCTGCTATTGGAGATGACATTAGCATTCAACTGGTTTCTAGCATCGAGAGCAAATCAAGTCACCCTATGGCAGCTGCTCTTTTGGAATATGGAAGGCTACACTCTATCAAACCAATCCCCGAAAATGTGGAGCATTTTCAGAATTTTCCAGGGGAAGGAGTCTTTGGTAAAATTGATGGGAAAGATGTCTATATTGGCAACAGGAAAATAACTGTGAGAGCTGGCTGTGAAAGTGATTTTCAAAGCGAAGGAGAAATAAATGGTTATATATGCTGTGGACCGACTCTAGTTGGAGTGTTCGCACTATCTGATACATGCAGATCTGGTGCTTTAGAGGCAATAGAACAGCTTAAGTCCTTAGGCGTGAAATCAGTCATGCTGACAGGAGATAGCATTCAAGCTGCTAAGCTTGTTCAGAATCAGTTGAACTATGCTCTAGATGTAGTTCACGCAGAGCTTCTACCAGATGAAAAGGCAAAGATCATCGAGAATTTAAAGAAAGATGGGCTAACAGCCATGATCGGAGATGGTATAAATGATGCACCTGCATTAGCCACAGCCGATGTTGGCATTGCAATGGGAATCTCAGGTTCAGCTCTCACAGTTGAGACTGGGCATGCAATTCTCATGTCAAACGACATACGAAAGATACCTGAAGCCATTCACCTTGCAAAAAAAACTTCCAGAAAGCTCATTGAGAATGTCGTTTTTTCCATTGCCGCTAAGGGTTCCATGCTAGCGCTGGCAATAGCAGGATTTCCAATGGTTTGGCTTGCCGTTTTGACTGATGTTGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTACTTTTAAAAGACAAACACAAAAACAAAAGAGGATCCTGTACATCCACATATAGCTCCTTCTTAGAGGAAAAGAGCGCACCCTTACTTGACAAGCAAATTGATTGCAGTGAAGGATGTTGCAGCAATGTCTTTCATCAAAGGACAACTCCTAGTGCAACTGAACACGAAGCTTCTGGTTGTGATTCTGGACCTTCAAATCTGAGCTTGCTCGAGGGAGGACACTGTAGGAAAATGGTCTCAGATGAAGTTCAAATATTAAAGACATGCAATGATGGCTGTTGTGGTGGCAAAGCCAGGTCAGAGGAGCCTTCATGCAGAACAAAGAGTAGCTCTGATTGTTGCGTTCAACTGAACGCAGAAGCGCAGGTTAATACACAGAAGTGTGGTTCTGGGACATGTGGCACTCGTCAATGCTTCAAACAGTGCAGGAAGATATGCTGCAATGATCGTGTTACCATACCAGAAATTGTTATTGAGTGA 2823 0.4297 MDLLEIGFNEKKDEMTTIKLVRLELRDRLRELRASGSNDTRGKTYRLRTLIVEVNAVLFAVCVHDFTSLSLLRFDFCFASKAIGVVRCYCSPFPGIHRPKMVENLKKSNFEVLGMCCNSEVALIERILKRLHGVQQISVMFPTKTVTVVHDIHLISETQIADALNTARLEASLRPEGETKYEKKRPALTTLLCGLLLALSFLKYVYQPLGWLALVAVVIGFPRVLFRGIASIRNLTLDINILVLLAVCGTIALQDYWEGGIVIFLFSTVQWLETRASSQAMVTMSSLTNMVPQKAIIAETGQHVDVNAVKINTILAVKAGDVIPLDGLVVEGKCEVDEKMLTGESFPVTKELGSTVWAGTINLNGYISVKTTALANDTAVARMTKLVEEAHGRKSRTQRFIDTCAKYYLPVVVLISAGIAVIPIALRVPNINYWCRMAIVVLVSACPCALILSTPVAIFCALTKAATSGLLLKGGDYVETLAGIETVAFDKTGTITKGEFTVTDFSAIGDDISIQLVSSIESKSSHPMAAALLEYGRLHSIKPIPENVEHFQNFPGEGVFGKIDGKDVYIGNRKITVRAGCESDFQSEGEINGYICCGPTLVGVFALSDTCRSGALEAIEQLKSLGVKSVMLTGDSIQAAKLVQNQLNYALDVVHAELLPDEKAKIIENLKKDGLTAMIGDGINDAPALATADVGIAMGISGSALTVETGHAILMSNDIRKIPEAIHLAKKTSRKLIENVVFSIAAKGSMLALAIAGFPMVWLAVLTDVGTCLLVILNSMLLLKDKHKNKRGSCTSTYSSFLEEKSAPLLDKQIDCSEGCCSNVFHQRTTPSATEHEASGCDSGPSNLSLLEGGHCRKMVSDEVQILKTCNDGCCGGKARSEEPSCRTKSSSDCCVQLNAEAQVNTQKCGSGTCGTRQCFKQCRKICCNDRVTIPEIVIE 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1464 940 NCBIfam heavy metal translocating P-type ATPase 239 782 IPR027256 GO:0006812|GO:0016020|GO:0019829
Dere03g1464 940 ProSitePatterns Hypothetical cof family signature 2. 679 701 - -
Dere03g1464 940 Gene3D - 101 174 - -
Dere03g1464 940 FunFam Putative cadmium/zinc-transporting ATPase 3 102 175 - -
Dere03g1464 940 NCBIfam cadmium family heavy metal-translocating P-type ATPase 239 783 - -
Dere03g1464 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 239 768 IPR023298 -
Dere03g1464 940 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Dere03g1464 940 Pfam Heavy-metal-associated domain 110 156 IPR006121 GO:0046872
Dere03g1464 940 Gene3D - 479 730 IPR023214 -
Dere03g1464 940 Gene3D - 277 391 - -
Dere03g1464 940 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 103 786 - -
Dere03g1464 940 SUPERFAMILY HAD-like 486 780 IPR036412 -
Dere03g1464 940 Pfam haloacid dehalogenase-like hydrolase 484 693 - -
Dere03g1464 940 NCBIfam HAD-IC family P-type ATPase 263 758 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere03g1464 940 CDD HMA 110 172 IPR006121 GO:0046872
Dere03g1464 940 SUPERFAMILY Calcium ATPase, transduction domain A 301 387 IPR008250 -
Dere03g1464 940 FunFam Putative cadmium/zinc-transporting ATPase 3 499 611 - -
Dere03g1464 940 ProSiteProfiles Heavy-metal-associated domain profile. 106 172 IPR006121 GO:0046872
Dere03g1464 940 CDD P-type_ATPase_HM 200 781 - -
Dere03g1464 940 Gene3D - 499 611 IPR023299 GO:0000166
Dere03g1464 940 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Dere03g1464 940 PRINTS P-type cation-transporting ATPase superfamily signature 603 614 - -
Dere03g1464 940 PRINTS P-type cation-transporting ATPase superfamily signature 337 351 - -
Dere03g1464 940 PRINTS P-type cation-transporting ATPase superfamily signature 625 635 - -
Dere03g1464 940 PRINTS P-type cation-transporting ATPase superfamily signature 679 698 - -
Dere03g1464 940 SUPERFAMILY HMA, heavy metal-associated domain 102 177 IPR036163 GO:0046872
Dere03g1464 940 FunFam Copper-transporting ATPase 1, putative 277 391 - -
Dere03g1464 940 Pfam E1-E2 ATPase 298 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1464 Dere-ChrDere03 24229487 24237879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1464 103 891 Primary Pumps ATPases AT4G30110 53.892 0.0 876